Biostar LFC

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RNAseq LFC DEseq

10 weeks ago ayy2110 • 0

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266

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deseq2 LFC LRT

updated 2.5 years ago by Michael Love 33k • written 2.5 years ago by sally.badawi • 0

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307

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deseq2 lfc betaprior

updated 2.7 years ago by Michael Love 33k • written 2.7 years ago by Mariaxi • 0

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7.0k

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deseq2 lfc coef contrast

updated 4.0 years ago by Michael Love 33k • written 4.0 years ago by Anke Busch • 0

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1.3k

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limma microarray DEGs p values lfc

4.1 years ago rkp • 0

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7.2k

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deseq2 deseq lfc lfcse standard error

updated 4.3 years ago by rraadd_8 • 0 • written 4.4 years ago by tootiki • 0

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908

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microarray limma multiple treatments lfc

updated 5.2 years ago by Aaron Lun ★ 27k • written 5.2 years ago by brionyk9 • 0

7 results • Page 1 of 1

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Comment: Paired samples analysis by Hanan • 0

Thank you BioStars referred me to this [tutorial][1] . [1]: http://bioconductor.org/packages/devel/bioc/vignettes/DESeq2/inst/doc/DES…

Comment: cant read celfiles using oligo package by scipio04 • 0

i want to get a matrix in order to do population genomic analysis after it's about SNP the answer i received was about the right packa…

Comment: Bootstrap value using ape package and including it in phylogenetic tree by Kevin Blighe 3.2k

Hi, can you please elaborate further on what is the problem by showing a screenshot? Can you please also check the contents of your objects…

Answer: extracting the KEGG pathway for a set of genes by Kevin Blighe 3.2k

Hi Bogdan, I use *KEGGprofile*, but there are other options. The main function is `find_enriched_pathway()`, and it by default accepts…

Answer: cant read celfiles using oligo package by Kevin Blighe 3.2k

Hi, It seems that you already received an answer here: https://support.bioconductor.org/p/9138838/#9138849 What do you want to do wit…

Votes

Answer: Is there anyway to replace seqlevels in a txdb

Comment: Compilation fatal error: iostream.h: No such file or directory when installing R

Answer: tximeta countsFromAbundance for downstream analysis

A: plotPCA - how to add labels to a PCA plot

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