Bioconductor MeDIP-seq

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6.6k

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diffbind medip-seq edger deseq2

updated 6.5 years ago by Rory Stark ★ 5.2k • written 8.2 years ago by florian.noack ▴ 60

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1.9k

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R medips medip-seq

7.8 years ago • updated 6.9 years ago stb • 0

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1.7k

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MEDIP-seq CNV TCGA450KHumanMethylationCalibrationDataset qsea PRAD

3.0 years ago rtrivedi1 ▴ 10

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1.1k

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medips R medip-seq pair-end reads

updated 7.4 years ago by Lukas Chavez ▴ 570 • written 7.4 years ago by stb • 0

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1.2k

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medips medip-seq peak finding luckas

updated 7.0 years ago by Lukas Chavez ▴ 570 • written 7.0 years ago by anupriyaverma1408 • 0

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1.6k

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medips medip-seq error lukas

updated 7.0 years ago by Matthias Lienhard ▴ 240 • written 7.0 years ago by anupriyaverma1408 • 0

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1.9k

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medips bsgenome medip-seq

updated 6.2 years ago by Lukas Chavez ▴ 570 • written 6.2 years ago by vjain • 0

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1.3k

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MEDIPS MeDIP-seq

updated 2.6 years ago by Lukas ▴ 20 • written 4.5 years ago by lshepard ▴ 40

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1.5k

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R medip-seq medips bwa

updated 7.8 years ago by Lukas Chavez ▴ 570 • written 7.8 years ago by stb • 0

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1.1k

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medips medip-seq R pair-end reads

updated 7.7 years ago by Lukas Chavez ▴ 570 • written 7.7 years ago by stb • 0

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974

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medips medip-seq dna methylation dmr analysis

updated 5.5 years ago by Lukas Chavez ▴ 570 • written 5.5 years ago by mtefit • 0

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544

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R medip-seq MEDIPS

15 months ago Luomeng • 0

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771

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medip-seq createset

updated 5.3 years ago by Bioconductor Community 0 • written 5.5 years ago by oussama.badad • 0

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1.3k

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annotation chippeakanno rattus norvegicus medip-seq

8.2 years ago Vang Le ▴ 80

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822

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medip-seq methylation CpGs

5.5 years ago saripalligautam86 ▴ 10

15 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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