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MotifbreakR
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Is there a function that takes an amino acid string and returns all biologically possible substitutions?
Biostrings
aminoacid
motifbreakR
written 11 weeks ago by
wilson_ava
• 0
0
votes
0
replies
1.1k
views
motifBreakR error with custom BSgenome
GenomeInfoDb
motifbreakR
3.6 years ago • updated 3.5 years ago
Chris Seidel
▴ 80
0
votes
0
replies
1.0k
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR
R
motifs
5.5 years ago
camerond
• 0
2
votes
5
replies
2.8k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR
vcf
snps
motif analysis
updated 6.4 years ago by
Valerie Obenchain
★ 6.8k • written 6.4 years ago by
svlachavas
▴ 830
0
votes
0
replies
1.0k
views
Motif Breaker error
bioconductor
motifbreakr
plotmb
6.9 years ago
priyankaraina10
• 0
0
votes
2
replies
1.3k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR
variantannotation
updated 9.0 years ago by
Simon Coetzee
▴ 50 • written 9.0 years ago by
ashley.doane
▴ 20
6 results • Page
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Replies
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
dseauer
• 0
Thank you so much for all of your help! I really appreciate it!
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
Gordon Smyth
51k
Thanks for extra info, but be careful that the Bioconductor support site requires code to be an markdown format. Copying code with prompts …
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
dseauer
• 0
Thank you so much for your reply! I am sincerely sorry- of course I do not have multiple GAL files- just one- I meant gpr files! I am so so…
Comment: Is it possible to parallelise saveHDF5SummarizedExperiment
by
Stefano Mangiola
▴ 20
Thansk Herve', I will try. For reference this is the parallelization implementation of zellkonverter, to save anndata from SCE https://gi…
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
by
Jason
• 0
Any update on the resolution to this? I'm having the same issue with another species.
Votes
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
biomaRt rnorvegicus_gene_ensembl not available anymore
A: Does edgeR need to specify reference group?
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