Showing : MotifbreakR • reset
2
votes
5
replies
3.4k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR vcf snps motif analysis
updated 7.6 years ago by ★ 6.8k • written 7.6 years ago by ▴ 840
0
votes
2
replies
1.6k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR variantannotation
updated 10.2 years ago by ▴ 50 • written 10.2 years ago by ▴ 20
0
votes
2
replies
831
views
Is there a function that takes an amino acid string and returns all biologically possible substitutions?
Biostrings aminoacid motifbreakR
written 16 months ago by • 0
0
votes
0
replies
1.2k
views
Motif Breaker error
bioconductor motifbreakr plotmb
8.1 years ago priyankaraina10 • 0
0
votes
0
replies
1.3k
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR R motifs
6.7 years ago camerond • 0
0
votes
0
replies
1.5k
views
motifBreakR error with custom BSgenome
GenomeInfoDb motifbreakR
4.7 years ago Chris Seidel ▴ 80
6 results • Page 1 of 1
Recent ...
Replies
Comment: Joining different datasets and analyzing using the group-specific condition effe by jason.chai • 0
Thank you very much. I had read that and wondered if I used the recommendation in DESeq vignette, I would lose the pairing between groups? …
Comment: Questions about bacon QC and correction on EWAS results by sup0903 • 0
This is qq plot and histogram generated before bacon correction ![enter image description here][1] ![enter image description here][2] …
Comment: Ensembl site unresponsive via biomaRt by sebastianenewell • 0
> I think this is an unrelated issue. The original post includes the > message Error: 'curl_parse_url' is not an exported object from > 'na…
Comment: Development of MSstat workflow to analyze DIA time series data by Gordon Smyth 53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
Awards • All
Popular Question to maltethodberg ▴ 180
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Lluís Revilla Sancho ▴ 760
Commentator to James W. MacDonald 68k
Great Question to fl ▴ 20
Locations • All
Spain, 12 minutes ago
United Kingdom, 53 minutes ago
Denmark, 1 hour ago
United States, 1 hour ago
United Kingdom, 1 hour ago
Traffic: 1249 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6