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OmicCircos
•
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0
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778
views
Question about OmicCircos
OmicCircos
6.9 years ago
ch8316f5eyu
• 0
0
votes
0
replies
1.1k
views
Synteny plots with OmicCircos or Rcircos
omiccircos
rcircos
7.5 years ago
mictadlo
▴ 10
0
votes
0
replies
1.1k
views
Omiccircos: how to draw a circos plot for non-model organisms
omiccircos
seganglepo
sim.circos
circos
7.5 years ago
Didi
▴ 10
2
votes
3
replies
3.9k
views
Making a circos plot to show expression for a gene set rather than whole genome
Gene set
gene set analysis
omiccircos
updated 7.6 years ago by
yifangt
▴ 20 • written 10.2 years ago by
Peter.Wood
• 0
0
votes
0
replies
1.5k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
7.8 years ago
matthew.bashton
• 0
0
votes
1
reply
1.8k
views
Circos Tile colors
OmicCircos
RCircos
updated 7.9 years ago by
bernatgel
▴ 150 • written 7.9 years ago by
Radek
▴ 90
0
votes
1
reply
2.6k
views
OmicCircos - Error in 1:scale.n : NA/NaN argument
OmicCircos
8.0 years ago
Stefan Langenberg
• 0
0
votes
0
replies
1.2k
views
OmicCircos Error in Colnames attribute mus be the same length as the vector
r
omiccircos
8.1 years ago
theobroma22
▴ 10
0
votes
0
replies
1.4k
views
OmicCircos barplot height and scale
omiccircos
8.2 years ago
Miss Agnieszka Aleksandra Golicz
▴ 40
0
votes
0
replies
919
views
OmicCircos for non human genomes
omiccircos
rnaseq
plants
8.2 years ago
Didi
▴ 10
0
votes
0
replies
1.0k
views
Zoom function in OmicCircos
OmicCircos
Zoom
8.2 years ago
abmora
• 0
0
votes
0
replies
933
views
How to plot a single segment using OmicCircos?
omiccircos
8.6 years ago
Shambho
• 0
1
vote
0
replies
911
views
the 23re and 24th segs cannot be plotted
OmicCircos
8.7 years ago
magcj89
▴ 10
3
votes
2
replies
2.8k
views
How to represent a relationship between physical map and linkage map of a sequenced data using OmicCircos or another similar
omiccircos
software R
bioconductor for genomic data science
linkage disequilibrium
updated 9.0 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 9.0 years ago by
pertille
• 0
0
votes
0
replies
1.5k
views
Can OmicCircos handle chicken ChIA-PET interactome?
OmicCircos
chicken
9.2 years ago
Gary
▴ 20
0
votes
0
replies
1.7k
views
Circos Styling plots is now easy with canceR package
canceR
visualization
omiccircos
9.8 years ago
kmezhoud
▴ 10
0
votes
0
replies
1.5k
views
News:
OmicCircos was updated
visualization
omiccircos
News
10.0 years ago
Hu, Ying NIH/NCI [E]
▴ 50
1
vote
3
replies
1.7k
views
OmicCircos mapping data file.
omiccircos
updated 10.0 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.4 years ago by
abdul rawoof
▴ 60
0
votes
1
reply
1.9k
views
extdata missing for non-human OmicCircos plots?
OmicCircos
updated 10.0 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.4 years ago by
micahgearhart
• 0
0
votes
2
replies
2.2k
views
How to specifiy colors for polygon links when using circos function of OmicCircos package
graph
omiccircos
updated 10.0 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.0 years ago by
wei.shen
• 0
0
votes
1
reply
1.5k
views
Larger values masking others for OmicCircos heatmap
differential gene expression
heatmap
Circos
omiccircos
10.2 years ago
Peter.Wood
• 0
21 results • Page
1 of 1
Recent ...
Replies
Comment: error in ChAMP loading file
by
shocked.tick.zyet
• 0
Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…
Comment: orgDB
by
jenniferping36
• 0
Thanks for the suggestion! I'll check out the resources.
Comment: sesameDataCache is not work properly on my system
by
Samreen
• 0
Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…
Answer: Using tximport for kallisto aligned TOIL data
by
James W. MacDonald
68k
If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …
Answer: Reading gene expression data in GPR format and converting it to xlsx format
by
James W. MacDonald
68k
Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …
Votes
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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