Bioconductor ProteomicsWorkflow

Showing : ProteomicsWorkflow • reset

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488

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ProteomicsWorkflow PSMatch Spectra RforProteomics

updated 4 weeks ago by Laurent Gatto 1.6k • written 5 weeks ago by Jane_Huang • 0

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377

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Proteomics ProteoMM ProteomicsWorkflow Proteome

written 11 months ago by ary.lech ▴ 10

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8.6k

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limma ProteomicsWorkflow

updated 14 months ago by Gordon Smyth 51k • written 3.0 years ago by David Lyon ▴ 340

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914

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Proteomics RforProteomics ProteomicsWorkflow Spectra MassSpectrometryData

updated 15 months ago by Laurent Gatto 1.6k • written 15 months ago by mmvar • 0

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RforProteomics Proteomics ProteomicsWorkflow

updated 15 months ago by Laurent Gatto 1.6k • written 15 months ago by mmvar • 0

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Proteomics ProteoMM ProteomicsWorkflow

updated 15 months ago by mmvar • 0 • written 17 months ago by nkvnambiar • 0

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992

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ProteomicsWorkflow proteomics proteinProfiles

updated 20 months ago by Laurent Gatto 1.6k • written 3.9 years ago by yueli7 ▴ 20

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1.2k

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limma Proteomics ProteomicsWorkflow

updated 2.2 years ago by Gordon Smyth 51k • written 2.2 years ago by samantha.v.goncalves • 0

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1.2k

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msqrob2 ProteomicsWorkflow proteomics

updated 2.4 years ago by Gordon Smyth 51k • written 2.5 years ago by Jane ▴ 10

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886

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proteinProfiles ProteomicsWorkflow ProteomicsAnnotationHubData Proteomics

updated 3.2 years ago by Gordon Smyth 51k • written 3.2 years ago by ALOK • 0

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3.6k

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Proteomics ProteomicsWorkflow UniProt.ws

updated 3.8 years ago by James W. MacDonald 67k • written 3.8 years ago by Dario Strbenac ★ 1.5k

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1.7k

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ProteomicsWorkflow proteomics Proteome

3.9 years ago info ▴ 10

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Proteome ProteomicsWorkflow proteomics

updated 4.0 years ago by swbarnes2 ★ 1.4k • written 4.0 years ago by yueli7 ▴ 20

13 results • Page 1 of 1

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Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…

Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

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Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k