Bioconductor Reactome

Showing : Reactome • reset

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reactomepa reactome graphite

updated 7.9 years ago by gabriele.sales ▴ 100 • written 7.9 years ago by i.sudbery ▴ 40

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biomart reactome reactome.db id

updated 9.1 years ago by James W. MacDonald 67k • written 9.1 years ago by enricoferrero ▴ 660

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reactomepa reactome.db reactome proteomics uniprot accessions

updated 7.1 years ago by willem.ligtenberg ▴ 150 • written 7.1 years ago by Miguel.Cosenza ▴ 10

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reactomepa reactome gsea fgsea

6.5 years ago martin.busch • 0

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pathway SBGNview Reactome pathview PANTHER

written 3.7 years ago by Luo Weijun ★ 1.6k

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biomart REACTOME

updated 10.1 years ago by Steffen Durinck ▴ 90 • written 10.1 years ago by jz6002 • 0

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767

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Reactome

updated 2.7 years ago by James W. MacDonald 67k • written 2.7 years ago by S • 0

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bioconductor package reactome graph

updated 9.5 years ago by Johannes Rainer ★ 2.1k • written 9.5 years ago by Deepak Tanwar ▴ 10

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reactomepa reactome

updated 6.7 years ago by Guangchuang Yu ★ 1.2k • written 6.7 years ago by heir_of_isildur88 • 0

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reactomepa reactomepa reactome bioconductor viewpathway reactome.db reactome

6.5 years ago martin.busch • 0

10 results • Page 1 of 1

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Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by daldabrown9 • 0

For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/

Answer: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k

Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…

Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20

Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…

Comment: Help using rtracklayer for gene ID extraction by James W. MacDonald 67k

Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…

Comment: miRTarRnaseq library by María Calvo • 0

Hello Mercedeh, excuse me for not explaining it adecuately, Im using the "Part3 - Identify significant miRNA mRNA relationships for 2 time …

Votes

Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?

Answer: Feature Counts - potential bug with outfile.jcounts

Answer: Pre-filtering TPM kallisto for ssGSEA / DESeq2

Answer: Mapping Between GenBank ID's and Uniprot

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