Bioconductor Rhtslib

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892

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Rhts Rhtslib

4.7 years ago anand_mt ▴ 90

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10k

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Rhtslib installation error zlib

updated 6.2 years ago by leoadam014 • 0 • written 7.2 years ago by boboshaq • 0

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2.9k

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software error Rhtslib zlib.h

updated 6.2 years ago by Hervé Pagès 16k • written 6.2 years ago by juandenciso14 • 0

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2.9k

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biocLite package installation withr biocinstaller rhtslib

updated 7.3 years ago by Martin Morgan 25k • written 7.3 years ago by merv ▴ 150

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2.8k

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Rhtslib

updated 7.6 years ago by Hervé Pagès 16k • written 7.6 years ago by Aaron Lun ★ 29k

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1.8k

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diffhic csaw Rhtslib

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by favorov • 0

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2.8k

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Rhtslib htslib package

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by Shian Su ▴ 40

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Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

BTW, I tested with no issue on MacOS ARM on our previous github issue.

Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k

The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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Popular Question to Dario Strbenac ★ 1.6k

Scholar to Nikos Ignatiadis ▴ 180