Bioconductor Rhtslib

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765

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Rhts Rhtslib

3.9 years ago anand_mt ▴ 90

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9.2k

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Rhtslib installation error zlib

updated 5.5 years ago by leoadam014 • 0 • written 6.4 years ago by boboshaq • 0

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2.5k

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software error Rhtslib zlib.h

updated 5.5 years ago by Hervé Pagès 16k • written 5.5 years ago by juandenciso14 • 0

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2.6k

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biocLite package installation withr biocinstaller rhtslib

updated 6.5 years ago by Martin Morgan 25k • written 6.5 years ago by merv ▴ 150

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2.4k

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Rhtslib

updated 6.8 years ago by Hervé Pagès 16k • written 6.8 years ago by Aaron Lun ★ 28k

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1.6k

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diffhic csaw Rhtslib

updated 7.4 years ago by Martin Morgan 25k • written 7.4 years ago by favorov • 0

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2.3k

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Rhtslib htslib package

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by Shian Su ▴ 40

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Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Comment: concentration tables suitable as input for new packages? by wilkinson • 0

I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…

Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k

Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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