Showing : SNP • reset
0
votes
1
reply
881
views
Probe include snp in HG-U133_Plus_2
SNP probe SNP probe
updated 13.7 years ago by 68k • written 13.7 years ago by ▴ 970
0
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3
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2.2k
views
RE : maping SNPs
SNP Annotation Cancer SNPlocs TranscriptDb GenomicFeatures GenomicRanges SNP Annotation
updated 13.8 years ago by 16k • written 13.8 years ago by ▴ 450
0
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1
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1.7k
views
GenomeGraphs question
SNP biomaRt ideogram GenomeGraphs SNP biomaRt ideogram GenomeGraphs
updated 13.8 years ago by ▴ 50 • written 13.8 years ago by ▴ 930
0
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1
reply
1.2k
views
rtracklayer error
SNP BSgenome BSgenome rtracklayer SNP BSgenome BSgenome rtracklayer
updated 13.8 years ago by ★ 11k • written 13.8 years ago by ▴ 380
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1
reply
2.1k
views
PFAM gene enrichment test using GOstats and Category
SNP Annotation GO Organism affy GOstats Category SNP Annotation GO Organism affy
updated 13.8 years ago by ▴ 350 • written 13.9 years ago by ▴ 10
0
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0
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710
views
Bioconductor Digest, Vol 107, Issue 1
SNP Annotation probe affy biomaRt IRanges SNP Annotation probe affy biomaRt IRanges
13.9 years ago Peter Haverty ▴ 20
0
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1
reply
1.5k
views
Analysis of Omni Express / Omni Express FFPE chips
SNP PROcess ffpe SNP PROcess ffpe
updated 13.9 years ago by ★ 6.8k • written 13.9 years ago by ★ 13k
0
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0
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1.2k
views
Bioconductor Digest, Vol 106, Issue 21
SNP Microarray VariantAnnotation Annotation cdf probe affy limma PROcess oligo xps SNP
13.9 years ago Jing Huang ▴ 380
0
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0
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1.3k
views
Fwd: problems with pd.genomewidesnp.6
SNP Annotation PROcess SNP Annotation PROcess
13.9 years ago Benilton Carvalho ★ 4.3k
0
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0
replies
1.2k
views
Minor allele frequency comparison
SNP SNP
13.9 years ago Scott Harding ▴ 10
0
votes
1
reply
1.0k
views
using GenomicFeature
SNP SNP
updated 13.9 years ago by ★ 13k • written 13.9 years ago by ▴ 70
0
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1
reply
1.3k
views
custom SNPlocs / BSgenome package
SNP Annotation Organism Homo sapiens BSgenome SNPlocs BSgenome SNP Annotation Organism
updated 13.9 years ago by 16k • written 13.9 years ago by ▴ 100
0
votes
4
replies
1.8k
views
gwSnpTests in GGtools
SNP GO SNP GO
updated 14.0 years ago by 6.7k • written 14.0 years ago by ★ 13k
0
votes
3
replies
1.2k
views
solution for affy human 500k mapping snp array
SNP affy SNP affy
updated 14.0 years ago by 6.7k • written 14.0 years ago by ▴ 230
0
votes
9
replies
2.9k
views
Attribute in snp mart to get SNP function (e.g. synonymous, nonsynonymous) ?
SNP biomaRt SNP biomaRt
updated 14.0 years ago by ★ 6.8k • written 14.0 years ago by ▴ 100
0
votes
1
reply
833
views
meta analysis
SNP SNP
14.0 years ago Joao Fadista ▴ 40
0
votes
1
reply
1.7k
views
Does liftOver work for SNPs mapping to different chr between different builds
SNP GO Cancer SNPlocs rtracklayer SNP GO Cancer SNPlocs rtracklayer
updated 14.0 years ago by ★ 11k • written 14.0 years ago by ★ 1.0k
0
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3
replies
2.6k
views
Welcome to the "Bioconductor" mailing list
SNP biomaRt SNP biomaRt
updated 14.0 years ago by ▴ 70 • written 14.0 years ago by ▴ 100
0
votes
0
replies
932
views
Erros in crlmm Re: SNP 6 chip
SNP Sequencing affy oligo xps crlmm SNP Sequencing affy oligo xps crlmm
14.1 years ago Benilton Carvalho ★ 4.3k
0
votes
7
replies
1.7k
views
SNP 6 chip
SNP Sequencing affy SNP Sequencing affy
updated 14.1 years ago by 68k • written 14.1 years ago by ▴ 210
0
votes
5
replies
1.6k
views
need help with SNP6.0 quantile normalization
SNP Normalization cdf SNP Normalization cdf
updated 14.1 years ago by 6.7k • written 14.1 years ago by ▴ 30
0
votes
2
replies
1.0k
views
Rsamtools question
SNP SNP
updated 14.1 years ago by ★ 6.8k • written 14.1 years ago by ▴ 220
0
votes
0
replies
1.2k
views
R/Bioconductor package to analyze illumina iscan genotyping data
SNP PROcess SNP PROcess
14.1 years ago John Clark ▴ 10
0
votes
0
replies
1.1k
views
Packages for snp, CNV data
SNP SNP
14.1 years ago carol white ▴ 680
0
votes
1
reply
1.9k
views
biomaRt and HapMap
SNP HapMap biomaRt SNP HapMap biomaRt
updated 14.3 years ago by ▴ 540 • written 14.3 years ago by ▴ 10
0
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0
replies
738
views
LD and effective population size
SNP SNP
14.3 years ago Andrew Slack-Smith ▴ 10
0
votes
2
replies
1.6k
views
snpMatrix trouble with read.HapMap.data() and ld.snp()
SNP convert SNP convert
updated 14.4 years ago by ▴ 20 • written 14.4 years ago by ▴ 90
0
votes
0
replies
992
views
Segmentation fault using pair.result.ld.snp in snpMatrix package
SNP convert SNP convert
14.4 years ago rna seq ▴ 90
0
votes
1
reply
1.3k
views
GenomicFeatures more detail.
SNP annotate GenomicFeatures SNP annotate GenomicFeatures
updated 14.4 years ago by ★ 6.8k • written 14.4 years ago by ▴ 970
0
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1
reply
1.8k
views
convert GGtools object (generated by vcf2sm) to snpMatrix class or other class
SNP convert GGtools snpMatrix SNP convert GGtools snpMatrix
updated 14.4 years ago by 6.7k • written 14.4 years ago by ▴ 290
1
vote
0
replies
1.4k
views
biomart Ensembl Regulatory Build
SNP Transcription biomaRt SNP Transcription biomaRt
14.5 years ago Fabrice Tourre ▴ 970
0
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1
reply
2.0k
views
How to determine genes from BAM file and extract SNPs
SNP SNP
updated 14.5 years ago by 21k • written 14.5 years ago by ▴ 140
0
votes
5
replies
4.5k
views
Fast way to find which gene a snp located.
SNP GenomicFeatures SNP GenomicFeatures
updated 14.5 years ago by ▴ 10 • written 14.5 years ago by ▴ 970
0
votes
1
reply
1.3k
views
Problems Reading SNPs into snpMatrix
SNP snpMatrix SNP snpMatrix
updated 14.5 years ago by 6.7k • written 14.5 years ago by ▴ 10
0
votes
1
reply
1.3k
views
Affymetrix 250K SNP aCGH
aCGH SNP Normalization affy aCGH aCGH SNP Normalization affy aCGH
updated 14.5 years ago by ▴ 210 • written 14.5 years ago by ▴ 330
0
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0
replies
1.3k
views
snp anotation
SNP Annotation SNP Annotation
14.6 years ago Fabrice Tourre ▴ 970
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3
replies
2.3k
views
[Bioc-sig-seq] Bioconductor 2.8 is released
SNP Sequencing miRNA Microarray Annotation Normalization Pathways Preprocessing Survival
updated 14.6 years ago by ▴ 310 • written 14.6 years ago by ★ 8.2k
0
votes
4
replies
1.9k
views
Bioconductor 2.8 is released
SNP Sequencing miRNA Microarray Annotation Normalization Pathways Preprocessing Network
updated 14.6 years ago by ▴ 310 • written 14.6 years ago by ★ 8.2k
0
votes
1
reply
1.1k
views
Structural variations analysis
SNP GGtools SNP GGtools
updated 14.6 years ago by 6.7k • written 14.6 years ago by ▴ 160
0
votes
5
replies
1.8k
views
SNP retrieval between two mouse strains
SNP SNP
updated 14.6 years ago by 16k • written 14.6 years ago by ▴ 220
0
votes
2
replies
1.2k
views
Structural variations analysis
SNP SNP
updated 14.6 years ago by ★ 13k • written 14.6 years ago by ▴ 140
0
votes
0
replies
995
views
PhD position in statistical bioinformatics
SNP Genetics SNP Genetics
14.7 years ago David Edwards ▴ 20
0
votes
1
reply
1.7k
views
[Rocky] - Clarification for finding SNPs at 3'UTR, 5'UTR, CDS genomic regions
SNP Cancer GLAD SNP Cancer GLAD
updated 14.8 years ago by 16k • written 14.8 years ago by ▴ 30
0
votes
2
replies
1.8k
views
RE : RE : maping SNPs
SNP SNPlocs TranscriptDb IRanges GenomicFeatures SNP SNPlocs TranscriptDb IRanges
updated 14.8 years ago by ★ 6.8k • written 14.8 years ago by ▴ 450
0
votes
1
reply
1.6k
views
crlmm - Infinium iSelect HD Custom Genotyping
SNP beadarray crlmm SNP beadarray crlmm
updated 14.9 years ago by ▴ 1000 • written 14.9 years ago by ▴ 20
0
votes
0
replies
1.9k
views
RE : maping SNPs; first foundation challenge offered
SNP Annotation Cancer SNPlocs TranscriptDb biomaRt GenomicFeatures SNP Annotation Cancer
14.9 years ago Vincent J. Carey, Jr. 6.7k
0
votes
1
reply
2.4k
views
biomaRt - attribute mirbase is missing
SNP miRNA GUI biomaRt Vega SNP miRNA GUI biomaRt Vega
updated 14.9 years ago by ▴ 660 • written 14.9 years ago by ▴ 460
0
votes
1
reply
997
views
Problems creating CDF environment for Affymetrix SNP Array
SNP cdf SNP cdf
updated 14.9 years ago by 68k • written 14.9 years ago by ▴ 30
0
votes
0
replies
1.5k
views
qPCR Event Calendar - winter 2010
SNP qPCR Genetics Normalization Clustering Regression Cancer Breast Xenopus laevis probe
15.0 years ago qPCR Platform - the reference in real-t… ▴ 170
0
votes
1
reply
883
views
segmentation for Affy SNP arrays Mapping50K_Hind240
SNP affy SNP affy
updated 15.0 years ago by ★ 2.4k • written 15.0 years ago by ▴ 140
343 results • Page 4 of 7
Recent ...
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Comment: Save the Date: BioC2026 by eja.gsssssswwse.r.m • 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released! by eja.gsssssswwse.r.m • 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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