Bioconductor SpikeIn

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1.1k

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sperm Drosophila_melanogaster ATACSeq Normalization SpikeIn

updated 15 months ago by ATpoint ★ 5.0k • written 15 months ago by Katerina • 0

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737

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SpikeIn DESeq2 Normalization

written 17 months ago by ADopico • 0

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1.1k

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SpikeIn RUVSeq DESeq2 RUV

updated 18 months ago by Michael Love 43k • written 19 months ago by Ειρήνη • 0

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576

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DiffBind Errorinsocketconnection SpikeIn

21 months ago Virangika • 0

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1.1k

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SpikeIn DiffBind

2.9 years ago Weisheng • 0

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4.4k

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DESeq2 SpikeIn Normalization DifferentialExpression

updated 3.0 years ago by ATpoint ★ 5.0k • written 3.0 years ago by kalavattam ▴ 10

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3.1k

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DESeq2 SpikeIn Normalization

updated 21 months ago by maria.soler • 0 • written 3.0 years ago by kalavattam ▴ 10

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3.3k

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DiffBind SpikeIn Normalization ChIP-seq csaw

3.1 years ago spg • 0

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1.4k

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DiffBind ChIPSeq Normalization SpikeIn

4.3 years ago Drew • 0

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1.2k

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SpikeIn SingleCell

4.4 years ago mb1996 • 0

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2.0k

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ChIPSeq SpikeIn edgeR Normalization

4.5 years ago maria.soler • 0

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6.3k

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edgeR SpikeIn RNASeq

updated 2.3 years ago by Miguel • 0 • written 4.9 years ago by robert.chen • 0

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5.1k

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CUTandRUN edgeR Normalization SpikeIn ChIPSeq

updated 3.2 years ago by Bogdan ▴ 670 • written 5.3 years ago by Hesh ▴ 10

13 results • Page 1 of 1

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Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0

Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …

Votes

A: DESeq2 - VST eliminates zero values

Comment: Normalise to a housekeeping gene in DESEq2

Comment: limpa analysis advice

C: AnnotationForge makeOrgPackage rsqlite_send_query error

Answer: Limpa Pipeline Order

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Popular Question to James W. MacDonald 68k