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Showing :
Uniprot
•
reset
2
votes
14
replies
4.9k
views
Unimart not available in 2015?
biomart
uniprot
unimart
10.3 years ago
john
▴ 10
3
votes
11
replies
8.6k
views
GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
clusterProfiler
AnnotationHub
GO
uniprot
updated 2.1 years ago by
Guido Hooiveld
★ 4.1k • written 5.1 years ago by
Alberto
• 0
1
vote
7
replies
2.9k
views
UniProt.ws report 1:many mappings in a single row
uniprot.ws
UniProt
annotation
9.3 years ago
l.nilse
• 0
0
votes
6
replies
3.2k
views
converting UniProt to SGD ids using UniProt.wd
uniprot.ws
uniprot
ensembl
updated 11.2 years ago by
Marc Carlson
★ 7.2k • written 11.2 years ago by
Joseph Barry
▴ 160
2
votes
5
replies
6.5k
views
UniprotKB AC/ID to Entrez ID Conversion
ID
Uniprot
EntrezID
3.8 years ago
tom.kloter
• 0
2
votes
4
replies
4.2k
views
UniProt.ws version 2.10.2
uniprot.ws
subcellular location
uniprot
10.1 years ago
DHS
• 0
1
vote
4
replies
1.9k
views
UniProt.ws non-functional or abandoned?
uniprot.ws
uniprot
uniprot accessions
updated 7.3 years ago by
James W. MacDonald
68k • written 7.3 years ago by
balin
• 0
1
vote
4
replies
5.8k
views
problem with retrieving UniProt annotation data
uniprot.ws
uniprot
updated 11.0 years ago by
Marc Carlson
★ 7.2k • written 11.0 years ago by
Guido Hooiveld
★ 4.1k
0
votes
3
replies
1.6k
views
Accessing feature data of a Malus domestica Nimblegen microarray
nimblegen
Biomart
Uniprot
updated 9.3 years ago by
Gordon Smyth
53k • written 9.3 years ago by
theobroma22
▴ 10
2
votes
3
replies
1.7k
views
Uniprot and UniProt.ws
Uniprot
Annotation
Identifiers
6.9 years ago
Juliet Hannah
▴ 360
0
votes
3
replies
2.0k
views
Anotations Score of uniprot. ws
uniprot.ws
uniprot
updated 10.3 years ago by
James W. MacDonald
68k • written 10.3 years ago by
cerikahp
• 0
0
votes
2
replies
1.6k
views
Error retrieving data with biomaRt
biomart
r
getbm
uniprot
8.0 years ago
lluex.rova
• 0
4
votes
2
replies
1.4k
views
drawProteins from Uniprot entry (missing chain information)
drawProteins
uniprot
updated 7.1 years ago by
James W. MacDonald
68k • written 7.1 years ago by
mblango
• 0
0
votes
2
replies
2.2k
views
Missing ensembl_ids in biomaRt uniprot query
biomaRt
uniprot
ensembl
updated 11.2 years ago by
me
• 0 • written 11.2 years ago by
António Miguel de Jesus Domingues
▴ 510
2
votes
2
replies
1.8k
views
Is there a package that has Uniprot protein descriptions?
uniprot.ws
uniprot
uniprot accessions
software error
updated 10.3 years ago by
James W. MacDonald
68k • written 10.3 years ago by
john
▴ 10
0
votes
1
reply
1.7k
views
UniProt.ws - single database for two species
uniprot.ws
uniprot
updated 8.4 years ago by
James W. MacDonald
68k • written 8.4 years ago by
l.nilse
• 0
1
vote
1
reply
1.9k
views
UniProt.ws - Speeding up select() for data retrieval
UniProt.ws
UniProt
updated 5.3 years ago by
James W. MacDonald
68k • written 5.3 years ago by
JavierM
• 0
0
votes
1
reply
2.5k
views
org.Mm.eg.db UNIPROT missing values
Annotation
mouse
UNIPROT
updated 8.5 years ago by
Mike Smith
★ 6.6k • written 8.5 years ago by
julie.chevalier
• 0
4
votes
1
reply
2.3k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
10.0 years ago
Dario Strbenac
★ 1.6k
19 results • Page
1 of 1
Recent ...
Replies
Comment: Subsetting DDS object for individual conditions over time
by
A
▴ 60
Hi @atpoint Thank you for the quick reply! and this makes sense! I will confirm with a corr to see how the SFs differ but also how DE dif…
Answer: Subsetting DDS object for individual conditions over time
by
ATpoint
★ 5.0k
It would surprise my quite a bit if the size factors would differ notably between subset or not. I would always try to keep the size factor…
Comment: GSEA error
by
Adithi
• 0
Thank you so much. That makes perfect sense to me. I will work on this.
Comment: tximeta cannot open annotation gtf?
by
Michael Love
43k
Yes, so this is the same type of error you would get if you tried to assemble a *SummarizedExperiment* manually with tximport + GTF process…
Answer: tximeta cannot open annotation gtf?
by
ATpoint
★ 5.0k
> Timeout of 60 seconds was reached You have to increase the default timeout limits for downloads, `options(timeout=3600)`. GENCODE serve…
Votes
Answer: RNA Seq using Lrt
Answer: DESeq2 LRT Reduced Formula
Answer: DESeq2: LRT or WALD guidance
Answer: GSEA error
Answer: OrgDb for maize
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boczniak767
▴ 740
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shepherl
4.3k
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Gordon Smyth
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