Showing : Workflow • reset
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News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
5 months ago • updated 1 day ago shepherl 2.7k
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What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 8 months ago by 2.7k • written 9 months ago by • 0
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typo in rnaseqGene workflow vignette.
rnaseqGene workflow deseq2
updated 16 months ago by 32k • written 16 months ago by ★ 1.5k
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Issue installing RNA-seq workflow
software error deseq2 workflow rnaseqGene
updated 22 months ago by 25k • written 22 months ago by • 0
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RNA-Seq Workflow Example (not "airway") for R
RNA-Seq Workflow
updated 23 months ago by 42k • written 23 months ago by • 0
5 results • Page 1 of 1
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Answer: Effect of feature number on adjusted p-values by Aaron Lun ★ 26k
> I assume this will have an impact on identifying significant gene regulation events, as p-value correction for multiple testing (both BH …
Answer: After having the output from SingleR for cell type annotation, what's the next s by Aaron Lun ★ 26k
**SingleR** is a well-behaved classification method in that each cell's assigned cell type is independent of the presence/behavior of other…
Comment: Effect of feature number on adjusted p-values by Gordon Smyth 42k
I agree with ATpoint. I also think your assumption is incorrect. Clusters with more expressed genes will generally have more DE genes at a …
Comment: Effect of feature number on adjusted p-values by ATpoint ▴ 630
Wouldn't a proper DE analysis have a single count matrix with all involved genes and samples (or cell type, clusters, or whatever you analy…
Comment: Cannot install packages by BiocManager::install() by James • 0
Thanks so much for posting this! Have been going crazy all afternoon trying to install a package!
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Comment: How to download the ChAMP dependency ChAMPdata
Bioconductor Award for Outstanding Documentation
C: With DESeq2 "Not full rank" Error with design ~ line + time + condition
C: With DESeq2 "Not full rank" Error with design ~ line + time + condition
What does dba.PCA in DiffBind exactly do?
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Scholar to Aaron Lun ★ 26k
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