5 months ago • updated 1 day ago
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14 months ago
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18 months ago
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19 months ago • updated 18 months ago
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20 months ago • updated 19 months ago
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21 months ago • updated 20 months ago
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2.1 years ago • updated 22 months ago
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23 months ago
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24 months ago • updated 23 months ago
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Answer: Effect of feature number on adjusted p-values
by
Aaron Lun
★
26k
> I assume this will have an impact on identifying significant gene regulation events, as p-value correction for multiple testing (both BH …
Answer: After having the output from SingleR for cell type annotation, what's the next s
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Aaron Lun
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**SingleR** is a well-behaved classification method in that each cell's assigned cell type is independent of the presence/behavior of other…
Comment: Effect of feature number on adjusted p-values
by
Gordon Smyth
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I agree with ATpoint. I also think your assumption is incorrect. Clusters with more expressed genes will generally have more DE genes at a …
Comment: Effect of feature number on adjusted p-values
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ATpoint
▴
630
Wouldn't a proper DE analysis have a single count matrix with all involved genes and samples (or cell type, clusters, or whatever you analy…
Comment: Cannot install packages by BiocManager::install()
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James
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Thanks so much for posting this! Have been going crazy all afternoon trying to install a package!
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