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Deprecation
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3
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18
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5.1k
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News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
2.7 years ago • updated 22 months ago
shepherl
4.3k
0
votes
2
replies
1.7k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
2.9 years ago • updated 2.8 years ago
shepherl
4.3k
1
vote
8
replies
2.2k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 6.9 years ago by
shepherl
4.3k
0
votes
2
replies
1.4k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
3.4 years ago
shepherl
4.3k
0
votes
0
replies
1.4k
views
Running deprecated packages
ToPASeq
Deprecation
3.9 years ago
pgauthi1
• 0
0
votes
4
replies
1.9k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
3.9 years ago • updated 3.4 years ago
shepherl
4.3k
0
votes
5
replies
2.1k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
4.4 years ago • updated 3.9 years ago
shepherl
4.3k
2
votes
2
replies
2.1k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
5.2 years ago • updated 4.8 years ago
shepherl
4.3k
0
votes
3
replies
1.6k
views
Which library now contains the ssdCoverage command that used to be found in the htseqtools package for R version 4.0.1 ?
Deprecation
chipseq
htseqtools
Bioconductor
updated 5.0 years ago by
Basti
▴ 780 • written 5.0 years ago by
Mick
• 0
0
votes
0
replies
1.4k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
6.0 years ago
shepherl
4.3k
0
votes
1
reply
1.4k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
6.2 years ago
shepherl
4.3k
0
votes
0
replies
1.3k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
6.3 years ago
shepherl
4.3k
0
votes
2
replies
2.7k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
6.4 years ago • updated 6.3 years ago
shepherl
4.3k
0
votes
0
replies
1.5k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
6.5 years ago • updated 6.4 years ago
shepherl
4.3k
0
votes
1
reply
1.5k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
deprecation
release
News
6.6 years ago • updated 6.5 years ago
shepherl
4.3k
0
votes
3
replies
1.7k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
6.7 years ago
shepherl
4.3k
0
votes
1
reply
1.4k
views
News:
Initial List of Deprecated Packages Bioc 3.10
software
experimentdata
release
deprecation
annotation
News
6.8 years ago
shepherl
4.3k
17 results • Page
1 of 1
Recent ...
Replies
Comment: tximeta cannot open annotation gtf?
by
Michael Love
43k
Yes, so this is the same type of error you would get if you tried to assemble a *SummarizedExperiment* manually with tximport + GTF process…
Answer: tximeta cannot open annotation gtf?
by
ATpoint
★ 5.0k
> Timeout of 60 seconds was reached You have to increase the default timeout limits for downloads, `options(timeout=3600)`. GENCODE serve…
Answer: GSEA error
by
James W. MacDonald
68k
At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Votes
Answer: GSEA error
Answer: OrgDb for maize
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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