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Showing :
affyqcreport
•
reset
1
vote
3
replies
1.9k
views
QC for Affymetrix miRNA 4.0 arrays: Error from qc/QCReport
simpleaffy
affy
affyQCReport
9.3 years ago
federico.comoglio
▴ 100
0
votes
3
replies
1.4k
views
affyQCReport with drosgenome2cdf
affyQCReport
affyQCReport
updated 13.5 years ago by
James W. MacDonald
65k • written 13.5 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.0k
views
quality control of affy Chips for miRNA
miRNA
cdf
affy
simpleaffy
affyQCReport
affycoretools
miRNA
cdf
affy
simpleaffy
updated 13.2 years ago by
James W. MacDonald
65k • written 13.2 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
623
views
Re: how to evaluate the arrays quality
affyQCReport
affyQCReport
19.0 years ago
Craig Parman
▴ 10
0
votes
4
replies
1.2k
views
problem with loading affyQCReport
simpleaffy
affyQCReport
simpleaffy
affyQCReport
updated 18.4 years ago by
Seth Falcon
★ 7.4k • written 18.4 years ago by
Tuomas Raitila
▴ 10
0
votes
0
replies
814
views
simpleAffy, custom chip error
GO
cdf
probe
gcrma
simpleaffy
affyQCReport
GO
cdf
probe
gcrma
simpleaffy
affyQCReport
18.0 years ago
Wittner, Ben
▴ 290
0
votes
0
replies
890
views
Why mm's changing after bg.adjust.gcrma?
drosgenome1
cdf
Biobase
reposTools
affy
gcrma
affyPLM
simpleaffy
affyQCReport
affyio
cdf
18.0 years ago
Jenny Drnevich
★ 2.2k
0
votes
1
reply
1.1k
views
qc function missing in Linux version of simpleaffy
cdf
genefilter
affy
affydata
simpleaffy
affyQCReport
affyio
cdf
genefilter
affy
affydata
updated 17.8 years ago by
James W. MacDonald
65k • written 17.8 years ago by
Wolfgang Raffelsberger
▴ 160
0
votes
2
replies
1.6k
views
problem with hist.default in affystart in package affycoretools
GO
cdf
annotate
affy
limma
RBGL
simpleaffy
GOstats
Category
affyQCReport
affyio
GO
cdf
updated 17.4 years ago by
James W. MacDonald
65k • written 17.4 years ago by
Kimpel, Mark W
▴ 890
0
votes
4
replies
1.4k
views
error with AffyQCReport
cdf
annotate
affy
limma
RBGL
simpleaffy
GOstats
affyQCReport
cdf
annotate
affy
limma
updated 17.3 years ago by
Wolfgang Huber
★ 13k • written 17.3 years ago by
Mark W Kimpel
▴ 830
0
votes
3
replies
1.1k
views
AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)
cdf
genefilter
affy
simpleaffy
affyQCReport
cdf
genefilter
affy
simpleaffy
affyQCReport
updated 17.3 years ago by
Crispin Miller
★ 1.1k • written 17.3 years ago by
Emmanuel Levy
▴ 270
0
votes
8
replies
1.6k
views
oligo on R 2.4.1?
GO
Survival
annotate
genefilter
affy
affydata
matchprobes
affyQCReport
affyio
oligo
GO
updated 17.3 years ago by
Seth Falcon
★ 7.4k • written 17.3 years ago by
Jenny Drnevich
★ 2.2k
0
votes
0
replies
951
views
AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)
cdf
probe
genefilter
affy
simpleaffy
affyQCReport
cdf
probe
genefilter
affy
simpleaffy
17.3 years ago
Wu, Xiwei
▴ 350
0
votes
9
replies
1.8k
views
problem with function rma
Normalization
rat2302
cdf
genefilter
affy
simpleaffy
affyQCReport
affyio
Normalization
updated 17.0 years ago by
Seth Falcon
★ 7.4k • written 17.0 years ago by
julin@aecom.yu.edu
▴ 80
0
votes
0
replies
1.0k
views
Bioconductor web page
GO
Cancer
tkWidgets
reposTools
widgetTools
simpleaffy
affyQCReport
affyio
GO
Cancer
17.0 years ago
Seth Falcon
★ 7.4k
0
votes
2
replies
882
views
question on affyQCReport vignette
affyQCReport
affyQCReport
updated 16.0 years ago by
Keith Satterley
▴ 450 • written 16.0 years ago by
Mark W Kimpel
▴ 830
0
votes
1
reply
1.9k
views
.qcdef file
cdf
affyQCReport
cdf
affyQCReport
updated 15.9 years ago by
Mark Cowley
▴ 400 • written 15.9 years ago by
ucbtagi@ucl.ac.uk
▴ 20
0
votes
16
replies
1.9k
views
missing value
cdf
affy
affyQCReport
cdf
affy
affyQCReport
updated 15.8 years ago by
Hervé Pagès
16k • written 15.8 years ago by
Yisong Zhen
▴ 200
0
votes
4
replies
1.4k
views
Quality control;Missing value;installation
Cancer
cdf
affy
affyQCReport
affyio
arrayQualityMetrics
Cancer
cdf
affy
affyQCReport
updated 15.8 years ago by
rgentleman
★ 5.5k • written 15.8 years ago by
Yisong Zhen
▴ 200
0
votes
1
reply
1.2k
views
library(affyQCReport)-NA(arg1); arrayQualityMetrics-no end
Cancer
cdf
affy
simpleaffy
affyQCReport
affyio
arrayQualityMetrics
Cancer
cdf
affy
updated 15.8 years ago by
rgentleman
★ 5.5k • written 15.8 years ago by
Yisong Zhen
▴ 200
0
votes
0
replies
987
views
.qcdef file
cdf
probe
affyQCReport
cdf
probe
affyQCReport
14.4 years ago
Leonor Palmeira
▴ 100
0
votes
0
replies
862
views
Affy exon array equivalents of QC packages (affyPLM, arrayQualityMetrics & affyQCReport)
Cancer
affyPLM
affyQCReport
arrayQualityMetrics
Cancer
affyPLM
affyQCReport
14.0 years ago
Daniel Brewer
★ 1.9k
0
votes
2
replies
1.0k
views
Quality control on Human Affymetrix Exon microarrays
GO
Cancer
probe
affyQCReport
GO
Cancer
probe
affyQCReport
updated 13.8 years ago by
Wolfgang Huber
★ 13k • written 13.8 years ago by
Daniel Brewer
★ 1.9k
0
votes
0
replies
1.1k
views
drosophila2cdf in simpleaffy / affyQCReport
cdf
simpleaffy
affyQCReport
cdf
simpleaffy
affyQCReport
13.5 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
9
replies
2.1k
views
Error coerce in AffyQCReport
Cancer
Breast
affyQCReport
Cancer
Breast
affyQCReport
13.5 years ago
Lorenzo Melchor
▴ 50
0
votes
8
replies
1.5k
views
Unable to Generate QC Report for mogene10stv1
GO
affyQCReport
GO
affyQCReport
updated 13.4 years ago by
James W. MacDonald
65k • written 13.4 years ago by
Rick Frausto
▴ 110
0
votes
6
replies
1.5k
views
Unable to Generate QC Report for mogene10stv1
Annotation
GO
GUI
affy
PROcess
affyQCReport
Annotation
GO
GUI
affy
PROcess
affyQCReport
updated 13.4 years ago by
James W. MacDonald
65k • written 13.4 years ago by
Rick Frausto
▴ 110
0
votes
0
replies
1.1k
views
quality control of affy Chips for miRNA
miRNA
cdf
probe
affy
simpleaffy
affyQCReport
affycoretools
arrayQualityMetrics
miRNA
cdf
13.2 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
805
views
QC report
cdf
affy
affyQCReport
cdf
affy
affyQCReport
15.8 years ago
Yisong Zhen
▴ 10
0
votes
3
replies
1.8k
views
Bioconductor 3.13 installer reports that affyQCReport is not available
Install
3.13
affyQCReport
updated 2.5 years ago by
Miguel
▴ 10 • written 2.6 years ago by
lsmatott
• 0
30 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
makala
• 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
Erik Wright
▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
Matthew Thornton
▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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