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align
•
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0
votes
9
replies
2.6k
views
mapping FASTQ files to single gene (fluorescent reporter)
rsubread
alignment
align
5.4 years ago
A
▴ 40
1
vote
5
replies
2.4k
views
Error: Input Files have different Amount of Reads
SubRead
Align
Subjunc
updated 3.8 years ago by
James W. MacDonald
65k • written 3.8 years ago by
abano
• 0
1
vote
5
replies
1.8k
views
Error using Rsubread align: caugh segfault invalid permissions
rsubread
align
segfault
updated 7.9 years ago by
Wei Shi
★ 3.6k • written 7.9 years ago by
gerard_llimos
▴ 10
0
votes
1
reply
1.7k
views
RSubread 0% mapping
rsubread
mapping
featurecounts
align
8.4 years ago
Jo
▴ 30
5
votes
6
replies
1.6k
views
Rsubread malloc(): memory corruption
Rsubread
malloc
align
updated 4.5 years ago by
Gordon Smyth
50k • written 4.7 years ago by
Konstantinos Yeles
▴ 80
5
votes
6
replies
1.4k
views
Improving the performance of the align function from Rsubread for old Roche454 reads
align
rsubread
roche454
rnaseq
updated 5.0 years ago by
Wei Shi
★ 3.6k • written 5.0 years ago by
Raito92
▴ 60
2
votes
2
replies
1.3k
views
Rsubread doesn't output a .bai file
Rsubread
align
Alignment
updated 2.8 years ago by
Gordon Smyth
50k • written 2.8 years ago by
mike_flower
• 0
0
votes
4
replies
1.3k
views
segfault "memory not mapped" using align from Rsubread
Rsubread
align
4.1 years ago
Joseph Fass
▴ 70
0
votes
0
replies
716
views
SUBREAD Aligning reads with reference genome - Error in align The number of input file names is different from the number of output file names.
align
Alignment
subread
2.1 years ago
saira
• 0
0
votes
0
replies
608
views
Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom
Align
MicroarrayData
Alignment
Microarray
14 months ago
jsharif
• 0
10 results • Page
1 of 1
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Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…
Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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