Showing : annotation • reset
2
votes
15
replies
4.5k
views
Annotation of Affy Porcine Gene 1.0 ST array data
limma oligo annotation
updated 7 months ago by • 0 • written 11.1 years ago by • 0
0
votes
8
replies
2.5k
views
athPkgBuilder data source :missing probesets
Annotation Annotation
written 19.5 years ago by ▴ 870
0
votes
5
replies
2.5k
views
Aclust package: IlluminaHumanMethylation450kCHR37 not found
illuminahumanmethylation450k.db aclust methylation annotation illumina
written 9.5 years ago by • 0
0
votes
4
replies
9.5k
views
Bioconductor version cannot be validated
Bioconductor Annotation Ann
written 2.4 years ago by • 0
1
vote
2
replies
2.4k
views
help documentation for keytypes in annotationdbi packages
annotation
updated 12 months ago by ▴ 10 • written 5.3 years ago by • 0
0
votes
3
replies
2.7k
views
Connection error using biomaRt
biomart annotation
updated 7 months ago by • 0 • written 10.1 years ago by ▴ 10
2
votes
4
replies
337
views
Converting Probe IDs to HGNC symbols
Annotation biomaRt GEOquery
written 7 weeks ago by ▴ 10
1
vote
2
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1.3k
views
Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
annotation geneIDs flatheadmullet
updated 10 months ago by 68k • written 10 months ago by • 0
0
votes
2
replies
706
views
Annotation package for Manduca sexta
annotation Manducasexta AnnotationData
11 months ago GA ▴ 10
1
vote
1
reply
526
views
Merging annotation with differential expression output
annotation RNASeqData
updated 11 months ago by 68k • written 11 months ago by • 0
10 results • Page 1 of 1
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Answer: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
I'm not familiar with the packages you mention, but the whole reason why Bioconductor has versions is that code and annotation change. Code…
Comment: Question on processing compound protein groups in limpa by JKim • 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa by Gordon Smyth 53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input by Gordon Smyth 53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2 by a2a2hset32aa • 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Votes
Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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