Showing : annotationTools • reset
0
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957
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 23 months ago by ★ 5.0k • written 23 months ago by • 0
0
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1
reply
855
views
Which species does GO.db use
GO.db annotationTools
updated 2.3 years ago by ▴ 760 • written 2.3 years ago by • 0
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3
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1.2k
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Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 3.1 years ago by 68k • written 3.1 years ago by • 0
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0
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1.3k
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
4.0 years ago Shane • 0
2
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10
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3.5k
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Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 4.0 years ago by ★ 4.1k • written 4.0 years ago by • 0
0
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2
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1.6k
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Error log when I use biomaRt getBM
biomaRt annotationTools
updated 4.8 years ago by ★ 6.6k • written 4.8 years ago by • 0
1
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3
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1.7k
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Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 7.8 years ago by 68k • written 7.8 years ago by ▴ 70
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4
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2.0k
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Annotation Tools package
probe annotationTools probe annotationTools
updated 16.2 years ago by ▴ 20 • written 16.3 years ago by ▴ 20
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1
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1.6k
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 16.4 years ago by ▴ 20 • written 16.4 years ago by ▴ 50
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1.3k
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annotationTools incorrect use of ortholog
annotationTools annotationTools
17.3 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
10 results • Page 1 of 1
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Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k
If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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