Showing : annotationTools • reset
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 2.2 years ago by ★ 5.0k • written 2.2 years ago by • 0
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917
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Which species does GO.db use
GO.db annotationTools
updated 2.5 years ago by ▴ 760 • written 2.5 years ago by • 0
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Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 3.3 years ago by 68k • written 3.3 years ago by • 0
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
4.2 years ago Shane • 0
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10
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Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 4.3 years ago by ★ 4.1k • written 4.3 years ago by • 0
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2
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1.6k
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Error log when I use biomaRt getBM
biomaRt annotationTools
updated 5.0 years ago by ★ 6.6k • written 5.0 years ago by • 0
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Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 8.1 years ago by 68k • written 8.1 years ago by ▴ 70
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Annotation Tools package
probe annotationTools probe annotationTools
updated 16.5 years ago by ▴ 20 • written 16.5 years ago by ▴ 20
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 16.6 years ago by ▴ 20 • written 16.6 years ago by ▴ 50
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annotationTools incorrect use of ortholog
annotationTools annotationTools
17.6 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
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Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Comment: Error message that there is no package called Biobase by DamionLedner99 • 0
thanks for sharing!!! https://cran.r-project.org/
Votes
Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
A: DESeq2 normalization vs VST vs rlog
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
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