Showing : annotationTools • reset
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 21 days ago by ★ 3.6k • written 22 days ago by • 0
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216
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Which species does GO.db use
GO.db annotationTools
updated 4 months ago by ▴ 720 • written 4 months ago by • 0
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3
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614
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Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 14 months ago by 64k • written 14 months ago by • 0
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
2.1 years ago Shane • 0
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Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 2.1 years ago by ★ 3.8k • written 2.1 years ago by • 0
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Error log when I use biomaRt getBM
biomaRt annotationTools
updated 2.9 years ago by ★ 6.2k • written 2.9 years ago by • 0
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3
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Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 5.9 years ago by 64k • written 5.9 years ago by ▴ 70
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4
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1.4k
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Annotation Tools package
probe annotationTools probe annotationTools
updated 14.3 years ago by ▴ 20 • written 14.4 years ago by ▴ 20
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1.1k
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 14.5 years ago by ▴ 20 • written 14.5 years ago by ▴ 50
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annotationTools incorrect use of ortholog
annotationTools annotationTools
15.4 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
10 results • Page 1 of 1
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Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by samer • 0
This is the result i got when i only looked on day 04 for the gene in example 1 posted above dds_sub <- dds[, dds$date %in% c("day04"…
Answer: What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE) by James W. MacDonald 64k
There are two types of probes used by Illumina. The type I probes bind directly to the CpG site and have two different probes (one for a me…
Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by Michael Love 41k
Then for the remaining genes that you don't think are DE, just plot like this: ``` dds_sub <- dds[,dds$condition %in% c("x","y")] dropleve…
Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by samer • 0
yes i turned it off @mikelove
Answer: autonomics: example("read_somascan", package = "autonomics") fails, but not on B by Mike Smith ★ 6.2k
It looks like `autonomics` uses `BiocFileCache` to create a local copy of the data and save repeat downloading. Given the (relatively) rec…
Votes
Answer: What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)
Answer: WGCNA documentation not available
Comment: Can the limma package be applied to Log2 RUV-normalized data?
Comment: Can the limma package be applied to Log2 RUV-normalized data?
Answer: Correct the batch effect in methylation analysis in R
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