Showing : annotationTools • reset
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 12 months ago by ★ 4.6k • written 12 months ago by • 0
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626
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Which species does GO.db use
GO.db annotationTools
updated 16 months ago by ▴ 760 • written 16 months ago by • 0
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3
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971
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Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 2.2 years ago by 67k • written 2.2 years ago by • 0
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
3.1 years ago Shane • 0
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10
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2.9k
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Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 3.1 years ago by ★ 4.1k • written 3.1 years ago by • 0
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2
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1.3k
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Error log when I use biomaRt getBM
biomaRt annotationTools
updated 3.8 years ago by ★ 6.6k • written 3.9 years ago by • 0
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3
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1.4k
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Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 6.9 years ago by 67k • written 6.9 years ago by ▴ 70
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4
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1.8k
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Annotation Tools package
probe annotationTools probe annotationTools
updated 15.3 years ago by ▴ 20 • written 15.3 years ago by ▴ 20
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1.4k
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 15.5 years ago by ▴ 20 • written 15.5 years ago by ▴ 50
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annotationTools incorrect use of ortholog
annotationTools annotationTools
16.4 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
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Answer: Deseq2 Error in solve.default(qr.R(qrx)) : 'a' (1 x 0) must be square by Michael Love 43k
I would check the rank of your model matrix, and perhaps meet with a local statistician who can help you create an appropriate design matri…
Comment: sva: get a sv for RIN scores by gabriel.hoffman ▴ 170
Agreed. I'll add that with small sample size, a covariate can explain some fraction of expression variation even under the null.
Comment: RSubread output significantly different from bash Subread output by Aimee • 0
Thank you! I will try rerunning with that parameter and see if it fixes the discrepancy! I'll report back. Update: This completely resolve…
Answer: RSubread output significantly different from bash Subread output by ATpoint ★ 4.6k
The R version counts multimappers (countMultiMappingReads is TRUE by default) while the command line version does not. It's beyond me why t…
Comment: Can't post a question? by Aimee • 0
I copied my text to a file in linux and ran: ```r grep --color='auto' -P -n "[^\x00-\x7F]" filename.txt ``` It highlighted everything that…
Votes
Answer: RSubread output significantly different from bash Subread output
Answer: RSubread output significantly different from bash Subread output
Answer: How to annotate a limma Elist raw class object with an annotation file
Comment: How to annotate a limma Elist raw class object with an annotation file
QSEA- Extraction of Normalized methylation across the samples
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