Showing : annotationTools • reset
0
votes
2
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1.1k
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 2.2 years ago by ★ 5.0k • written 2.2 years ago by • 0
0
votes
1
reply
918
views
Which species does GO.db use
GO.db annotationTools
updated 2.5 years ago by ▴ 760 • written 2.5 years ago by • 0
0
votes
3
replies
1.2k
views
Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 3.3 years ago by 68k • written 3.3 years ago by • 0
0
votes
0
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1.4k
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
4.2 years ago Shane • 0
2
votes
10
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3.8k
views
Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 4.3 years ago by ★ 4.1k • written 4.3 years ago by • 0
0
votes
2
replies
1.6k
views
Error log when I use biomaRt getBM
biomaRt annotationTools
updated 5.0 years ago by ★ 6.6k • written 5.0 years ago by • 0
1
vote
3
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1.8k
views
Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 8.1 years ago by 68k • written 8.1 years ago by ▴ 70
0
votes
4
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2.1k
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Annotation Tools package
probe annotationTools probe annotationTools
updated 16.5 years ago by ▴ 20 • written 16.5 years ago by ▴ 20
0
votes
1
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1.6k
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 16.6 years ago by ▴ 20 • written 16.6 years ago by ▴ 50
0
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0
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1.4k
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annotationTools incorrect use of ortholog
annotationTools annotationTools
17.6 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
10 results • Page 1 of 1
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Comment: GOseq Probability Weight Function bad fit by a2sahaaaq2c • 0
the mobile gaming world offers a different kind of strategic challenge. Many users today are shifting from heavy data processing to lighthe…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
Comment: DiffBind plot.profile error by a2sahaaaq2c • 0
To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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