Showing : annotationtools • reset
0
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2
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685
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 14 months ago by ★ 4.6k • written 14 months ago by • 0
0
votes
1
reply
671
views
Which species does GO.db use
GO.db annotationTools
updated 18 months ago by ▴ 760 • written 18 months ago by • 0
0
votes
3
replies
998
views
Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 2.3 years ago by 67k • written 2.3 years ago by • 0
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0
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1.1k
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
3.2 years ago Shane • 0
2
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10
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3.0k
views
Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 3.3 years ago by ★ 4.1k • written 3.3 years ago by • 0
0
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2
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1.4k
views
Error log when I use biomaRt getBM
biomaRt annotationTools
updated 4.0 years ago by ★ 6.6k • written 4.0 years ago by • 0
1
vote
3
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1.5k
views
Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 7.1 years ago by 67k • written 7.1 years ago by ▴ 70
0
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4
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1.8k
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Annotation Tools package
probe annotationTools probe annotationTools
updated 15.5 years ago by ▴ 20 • written 15.5 years ago by ▴ 20
0
votes
1
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1.4k
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 15.6 years ago by ▴ 20 • written 15.6 years ago by ▴ 50
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0
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1.2k
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annotationTools incorrect use of ortholog
annotationTools annotationTools
16.6 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
10 results • Page 1 of 1
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Comment: input for singR function by iamin053 • 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Comment: build samplesheet and plot profile by yf • 0
![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a
Answer: I am having issues with bowtie2_build by James W. MacDonald 67k
Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k
Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Votes
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
A: Doubt about the "zero expression" genes or genes with no reads at all in the co
Answer: Unable to install nloptr
Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
C: How does edgeR cpm function calculate log(CPM) values?
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