Showing : annotationtools • reset
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Fail to annotate chromosome data to single cell sequencing data obtained from cellranger
AnnotationHubSoftware SingleCellData annotationTools
updated 16 months ago by ★ 4.8k • written 17 months ago by • 0
0
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1
reply
740
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Which species does GO.db use
GO.db annotationTools
updated 20 months ago by ▴ 760 • written 20 months ago by • 0
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3
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1.1k
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Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bioconductor
annotationTools
updated 2.5 years ago by 68k • written 2.5 years ago by • 0
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Error with getBM: 'The query to the BioMart webservice returned an invalid result.'
process annotationTools AnnotationFilter Annotation biomaRt
3.4 years ago Shane • 0
2
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10
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3.1k
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Getting Bioconductor genome wide annotation for Candida auris
AnnotationFilter annotationTools AnnotationHub AnnotationData
updated 3.5 years ago by ★ 4.1k • written 3.5 years ago by • 0
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2
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1.4k
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Error log when I use biomaRt getBM
biomaRt annotationTools
updated 4.2 years ago by ★ 6.6k • written 4.2 years ago by • 0
1
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3
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1.5k
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Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 7.2 years ago by 68k • written 7.2 years ago by ▴ 70
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4
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1.8k
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Annotation Tools package
probe annotationTools probe annotationTools
updated 15.7 years ago by ▴ 20 • written 15.7 years ago by ▴ 20
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1
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1.4k
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Annotation Tools package
GO mouse430a2 probe convert annotationTools GO mouse430a2 probe convert annotationTools
updated 15.8 years ago by ▴ 20 • written 15.8 years ago by ▴ 50
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1.2k
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annotationTools incorrect use of ortholog
annotationTools annotationTools
16.8 years ago Nathan.Watson-Haigh@csiro.au ▴ 210
10 results • Page 1 of 1
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Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k
In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.
Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k
If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…
Answer: PhD scholar by ATpoint ★ 4.8k
Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…
Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k
Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…
Answer: fast apply on RleList by story.benjamin ▴ 20
solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…
Votes
Answer: Origin of the labels for the SingleCellMultiModal dataset
Answer: PhD scholar
Answer: how to use `arrayWeightsQuick()`?
Answer: how to use `arrayWeightsQuick()`?
Having Trouble Using CNE12() and CNE21() in CNEr
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Popular Question to Robert Castelo ★ 3.4k
Scholar to Gordon Smyth 52k
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Scholar to story.benjamin ▴ 20
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