Showing : biobase • reset
0
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4
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2.2k
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[R-SIG-Mac] Mac os x graphviz-Rgraphviz problem
Biobase annotate geneplotter graph Rgraphviz BUS Biobase annotate geneplotter graph BUS
updated 18.7 years ago by ★ 7.4k • written 18.7 years ago by ★ 6.5k
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2
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1.6k
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OSX binary graphviz, binary Rgraphviz install problems
Biobase graph Rgraphviz Biobase graph Rgraphviz
updated 18.7 years ago by ★ 7.4k • written 18.7 years ago by ▴ 60
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0
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1.4k
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Mac os x graphviz-Rgraphviz problem
Biobase annotate graph Rgraphviz BUS Biobase annotate graph Rgraphviz BUS
18.7 years ago Gavai, Anand ▴ 40
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1.1k
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Announcement: BioConductor Developer Workshop
Annotation Biobase Annotation Biobase
18.7 years ago Darlene Goldstein ▴ 230
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3
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1.6k
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GOstats hyperGTest question
Biobase annotate genefilter multtest graph Biobase annotate genefilter multtest graph
updated 18.7 years ago by ★ 7.4k • written 18.7 years ago by ▴ 80
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0
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744
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beadarray: problem with reading in Bead Summary Data
Biobase affy affyio beadarray Biobase affy affyio beadarray
18.8 years ago Perry Moerland ▴ 130
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1.4k
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flagging spots in marray
aCGH Microarray Normalization GO Cancer Biobase annotate genefilter affy affydata limma
18.8 years ago Gordon Smyth 53k
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2
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1.1k
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Developer Meeting in Lausanne CH 4.+5. April 2007
Biobase Biobase
updated 18.8 years ago by ▴ 180 • written 18.8 years ago by ★ 13k
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11
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3.3k
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trouble hacking plotPCA
GO Survival Biobase genefilter affy affydata graph limma gcrma matchprobes affyPLM RBGL
updated 18.8 years ago by ▴ 10 • written 18.8 years ago by ★ 2.2k
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2
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1.2k
views
R-2.4.0/bioconductor/darwin kernel version problem
Biobase affy Biobase affy
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ▴ 70
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1
reply
3.2k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 18.9 years ago by 68k • written 18.9 years ago by ▴ 510
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5
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2.2k
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error coercing an exprSet to ExpressionSet
GO cdf Biobase annotate multtest affy limma RBGL GOstats Category affycoretools GO cdf
updated 18.9 years ago by ★ 7.4k • written 18.9 years ago by ▴ 890
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1
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1.5k
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warning from make.cdf.package - FYI
GO Survival cdf Biobase annotate genefilter graph makecdfenv limma gcrma matchprobes GO
updated 18.9 years ago by 68k • written 18.9 years ago by ★ 2.2k
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5
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2.2k
views
Importing CDF file for custom array using makecdfenv
Microarray GO Survival Cancer cdf Biobase annotate genefilter affy graph makecdfenv GO
updated 18.9 years ago by ▴ 20 • written 18.9 years ago by ★ 2.2k
0
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1
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1.7k
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[Bioc-devel] SNPscan -> SNPchip
SNP Annotation Yeast Biobase SNPchip SNP Annotation Yeast Biobase SNPchip
updated 18.9 years ago by ▴ 250 • written 18.9 years ago by ▴ 170
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1.4k
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problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest affy affydata graph limma gcrma
18.9 years ago Martin Morgan 25k
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4
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1.6k
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problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest reposTools affy affydata graph GO
updated 18.9 years ago by 25k • written 18.9 years ago by ★ 2.2k
0
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2
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1.3k
views
beadarray example data problem
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.0 years ago • updated 18.9 years ago Keith Satterley ▴ 450
0
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3
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1.3k
views
beadarray example data problem 2
Biobase affy affyio beadarray Biobase affy affyio beadarray
18.9 years ago Martin Morgan 25k
0
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0
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1.2k
views
Error in xval: No Direct or Inherited Method for this call
Biobase MLInterfaces Biobase MLInterfaces
19.0 years ago mpg33@drexel.edu ▴ 90
0
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0
replies
1.4k
views
Error in xval: No Direct or Inherited Method for this call
Survival Biobase genefilter MLInterfaces Survival Biobase genefilter MLInterfaces
19.0 years ago Martin Morgan 25k
0
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0
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945
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error when restoring workspace containing exprSet objects
Biobase Biobase
19.1 years ago Christos Hatzis ▴ 90
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0
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622
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convert library for microarrays data
Biobase Biobase
19.1 years ago Seth Falcon ★ 7.4k
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2
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1.4k
views
error with GOHyperG
drosophila2 cdf Biobase annotate genefilter multtest RBGL GOstats drosophila2 cdf RBGL
updated 19.1 years ago by ★ 7.4k • written 19.1 years ago by ▴ 10
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1
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1.1k
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qc
Survival Biobase genefilter affy affydata affyPLM simpleaffy affyio Survival Biobase
updated 19.1 years ago by 68k • written 19.1 years ago by ▴ 10
0
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5
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2.3k
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RMA and justRMA error
Cancer cdf Biobase affy gcrma affyio Cancer cdf Biobase affy gcrma affyio
19.1 years ago Aedin Culhane ▴ 510
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1
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1.5k
views
[R] problem loading affycoretools - solved!
Biobase Ruuid genefilter multtest graph limma gcrma matchprobes affyPLM RBGL simpleaffy
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ★ 2.2k
0
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2
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1.8k
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problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
19.2 years ago Jenny Drnevich ★ 2.2k
0
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0
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1.4k
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how to retrieve data in list using getBM in biomaRt package?
Microarray GO Cancer probe Biobase annotate limma biomaRt Microarray GO Cancer probe
19.2 years ago James W. MacDonald 68k
0
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1
reply
1.2k
views
Too many open files error with groupName = "all" in biocLite() call on Apple OS X
Cancer Breast Biobase AnnBuilder xcms Cancer Breast Biobase AnnBuilder xcms
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 310
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5
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2.0k
views
Errors using biocLite on Apple OS X
GUI Cancer Breast Biobase GUI Cancer Breast Biobase
19.2 years ago Steven McKinney ▴ 310
0
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6
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1.8k
views
Error loading, on Bioconductor 1.8, exprSet generated with bioconductor 1.7
Biobase affy Biobase affy
updated 19.3 years ago by 25k • written 19.3 years ago by ▴ 500
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0
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1.1k
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Why mm's changing after bg.adjust.gcrma?
drosgenome1 cdf Biobase reposTools affy gcrma affyPLM simpleaffy affyQCReport affyio cdf
19.4 years ago Jenny Drnevich ★ 2.2k
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4
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2.3k
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Failure to load Biobase
Biobase affy limma gcrma matchprobes affyio Biobase affy limma gcrma matchprobes affyio
updated 19.4 years ago by 25k • written 19.4 years ago by ★ 2.2k
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3
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1.5k
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Newbie 'rflowcyt' question; problem loading facscan256.fcs
Biobase rflowcyt Biobase rflowcyt
updated 19.4 years ago by ▴ 140 • written 19.4 years ago by ▴ 80
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4
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1.5k
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Communicating gene-probe relationships to sam
SNP Biobase siggenes SNP Biobase siggenes
19.4 years ago Charles Crane ▴ 30
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0
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646
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Sam always wants more observations
probe Biobase affy affyPLM probe Biobase affy affyPLM
19.4 years ago Charles Crane ▴ 30
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0
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1.2k
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limma, marray and Agilent 44K
Normalization Biobase vsn limma marray Normalization Biobase vsn limma marray
19.5 years ago Nataliya Yeremenko ▴ 100
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0
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1.1k
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Limma, marray and Agilent 44K
Normalization Biobase vsn limma marray convert Normalization Biobase vsn limma marray
19.5 years ago Nataliya Yeremenko ▴ 10
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3
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1.8k
views
error in mas5calls() for soybean chip
Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4
updated 19.5 years ago by ▴ 70 • written 19.5 years ago by ★ 2.2k
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0
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939
views
lost inherent methods of hist() for AffyBatch objects
cdf Biobase affy cdf Biobase affy
19.6 years ago Jenny Drnevich ★ 2.2k
0
votes
1
reply
887
views
C entry point "ReadHeader" not in DLL for package "affy"
Biobase affy affyio Biobase affy affyio
updated 19.6 years ago by ★ 1.2k • written 19.6 years ago by ▴ 890
0
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1
reply
1.2k
views
GEOquery & GDS2eSet error
Annotation Cancer Breast Biobase affy limma AnnBuilder GEOquery Annotation Cancer Breast
updated 19.6 years ago by 21k • written 19.6 years ago by ▴ 300
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2
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1.5k
views
continued problems with ReadAffy
Biobase affy Biobase affy
19.7 years ago Kimpel, Mark W ▴ 890
0
votes
0
replies
776
views
problems with GO package data
GO Cancer hgu95av2 probe Biobase annotate genefilter multtest graph GOstats GO Cancer
19.7 years ago Yu-An Dong ▴ 40
0
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0
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584
views
installation problem / CRAN.packages deprecatedwarningmessage
Biobase Biobase
19.7 years ago Belooussov, Anton ▴ 50
0
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1
reply
4.9k
views
R package Installation Errors
Survival Biobase affy Survival Biobase affy
updated 19.7 years ago by 25k • written 19.7 years ago by ▴ 60
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0
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1.1k
views
missing function in duplicateCorrelation?
Biobase affy affydata limma affyPLM Biobase affy affydata limma affyPLM
19.8 years ago Jenny Drnevich ★ 2.2k
0
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3
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1.7k
views
bugs in arrayQuality and marray
Normalization Biobase hexbin arrayQuality marray Normalization Biobase hexbin arrayQuality
19.8 years ago Paquet, Agnes ▴ 500
0
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2
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1.2k
views
bug in overview function of made4
Biobase affy marray convert made4 Biobase affy marray convert made4
updated 19.8 years ago by ▴ 510 • written 19.9 years ago by ★ 2.2k
288 results • Page 4 of 6
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Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0
The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…
Answer: Gatins Set error by James W. MacDonald 68k
`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.
Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k
Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…
Comment: incomplete imputation of missing values with LEA impute() function by Gordon Smyth 53k
Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…
Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k
FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…
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Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Answer: ordinary t from limma [was: How would I normally compare swirl?]
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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