Showing : cancer genomics • reset
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Job: JOB: Research Associate in Computational / Statistical Epigenomics and Single-Cell Omics
Cancer Genomics Cancer Epigenomics Single-cell RNA-Seq Network theory Job
updated 6.8 years ago by • 0 • written 6.8 years ago by ▴ 60
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Job: PhD and PostDoc position in computational cancer biology in Milan
bioinformatician job bioinformatics scientist cancer genomics biostatistics network analysis Job
7.1 years ago marschaefer • 0
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MultiAssayExperiment: how to store data for multiple cancer lesions for each patients
multiassayexperiment summarizedexperiment cancer genomics
7.5 years ago mario.zanfardino ▴ 160
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
7.7 years ago kieranrcampbell ▴ 50
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Job: APPLIED RESEARCH SCIENTIST II, Cancer Epidemiology dept., Moffitt Cancer Center, Tampa, FL
genetic epidemiology cancer genomics computational biology biostatistics moffitt cancer center Job
7.8 years ago claudia.lopez-matamoros • 0
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Job: PhD opportunity in St Andrews (Proteomic and Genomic analysis of Oesophageal Cancers)
proteomics cancer genomics Job
8.2 years ago Andy Lynch ▴ 120
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Job: Summer Studentships in Data Science (Computational Cancer Biology) at the University of Cambridge
R python deep learning machine learning cancer genomics Job
8.7 years ago Shamith.Samarajiwa ▴ 180
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Job: Hunting for Human Infectious Agents in Cancer using data from Genomics England's 100,000 genome project : PhD Studentship @ UEA, Norwich
PhD cancer genomics bacteria pathogens Job
8.8 years ago Daniel Brewer ▴ 100
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Job: PhD Positions in Computational Cancer Research
computational biology image analysis cancer genomics statistics Job
9.0 years ago Bernd Fischer ▴ 550
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Job: Bioinformatics Postdocs at Memorial Sloan Kettering Cancer Center in New York
cancer genomics R computational biology bioconductor bioinformatics scientist Job
9.2 years ago weinhold • 0
10 results • Page 1 of 1
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Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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