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cellHTS2
•
reset
0
votes
5
replies
1.9k
views
Question regarding cellhts2 output
Normalization
Visualization
PROcess
cellHTS2
ASSIGN
Normalization
Visualization
PROcess
11.1 years ago
maziz@tgen.org
▴ 70
1
vote
5
replies
1.8k
views
B-Score problems with CellHTS2
B-Score
cellhts2
normalization
updated 8.7 years ago by
Joseph Barry
▴ 160 • written 8.7 years ago by
zmorehouse
• 0
0
votes
8
replies
1.7k
views
Failed to annotated my wells
cellhts2
updated 8.8 years ago by
Joseph Barry
▴ 160 • written 8.8 years ago by
wstoo1
• 0
0
votes
1
reply
1.6k
views
cellHTS2 : negative values after normalization
cellhts2
updated 8.7 years ago by
Joseph Barry
▴ 160 • written 8.7 years ago by
User34591
• 0
0
votes
2
replies
1.4k
views
Question regarding cellhts2 output
Normalization
cellHTS2
ASSIGN
Normalization
cellHTS2
ASSIGN
11.8 years ago
maziz@tgen.org
▴ 70
0
votes
2
replies
1.3k
views
cellHTS2 error in writeReport
cellHTS2
cellHTS2
updated 15.9 years ago by
Wolfgang Huber
★ 13k • written 15.9 years ago by
Steve Taylor
▴ 280
0
votes
4
replies
1.3k
views
Question regarding cellhts2 output
Normalization
cellHTS2
Normalization
cellHTS2
updated 11.9 years ago by
maziz@tgen.org
▴ 70 • written 11.9 years ago by
Joseph Barry
▴ 160
0
votes
1
reply
1.3k
views
CellHTS Replicates Missing
Cancer
cellHTS2
Cancer
cellHTS2
updated 14.8 years ago by
Florian Hahne
▴ 540 • written 14.8 years ago by
Becky Saunders
▴ 40
0
votes
2
replies
1.3k
views
cellHTS2 variance by plate calculation?
Normalization
GO
cellHTS2
Normalization
GO
cellHTS2
updated 12.4 years ago by
Joseph Barry
▴ 160 • written 12.4 years ago by
Guest User
★ 13k
0
votes
0
replies
1.2k
views
[Fwd: batch info for cellHTS]
GO
Cancer
cellHTS
cellHTS2
GO
Cancer
cellHTS
cellHTS2
15.6 years ago
Florian Hahne
▴ 540
0
votes
0
replies
1.2k
views
BioConductor Developer Workshop Lausanne 2008 Info
SNP
Annotation
annaffy
AnnBuilder
biomaRt
cellHTS2
SNP
Annotation
annaffy
AnnBuilder
16.2 years ago
Darlene Goldstein
▴ 230
0
votes
3
replies
1.2k
views
cellHTS2 writeReport error
cellHTS2
cellHTS2
updated 15.8 years ago by
rclement
▴ 20 • written 15.8 years ago by
Becky Saunders
▴ 40
2
votes
3
replies
1.2k
views
cellHTS2 importa and analysing data from chemical compound screening
cellhts2
cheminformatics
updated 7.4 years ago by
Joseph Barry
▴ 160 • written 7.4 years ago by
Andreia Fonseca
▴ 810
0
votes
0
replies
1.1k
views
Bioconductor package cellHTS2
cellHTS
cellHTS2
cellHTS
cellHTS2
11.9 years ago
Joseph Barry
▴ 160
0
votes
1
reply
1.1k
views
[cellHTS2] error message with DualChannelScreen on example dataset
cellHTS2
cellHTS2
updated 11.5 years ago by
Wolfgang Huber
★ 13k • written 11.5 years ago by
Vipin T Sreedharan
▴ 10
0
votes
3
replies
1.1k
views
cellHTS2 configure error
cellHTS2
updated 8.2 years ago by
Joseph Barry
▴ 160 • written 8.2 years ago by
eduardo.andres.leon
• 0
0
votes
2
replies
1.1k
views
cellHTS2 and channelNames
cellHTS
cellHTS2
cellHTS
cellHTS2
updated 11.0 years ago by
Wolfgang Huber
★ 13k • written 11.0 years ago by
Mark Dane
▴ 40
0
votes
1
reply
1.1k
views
Definition of the CellHTS2 normalizePlates parameter scale
Normalization
cellHTS2
Normalization
cellHTS2
updated 15.7 years ago by
Elin Axelsson
▴ 60 • written 15.7 years ago by
c.lieftink@nki.nl
▴ 40
0
votes
0
replies
1.0k
views
Definition of the CellHTS2 normalizePlates parameter scale
Normalization
cellHTS2
Normalization
cellHTS2
15.7 years ago
c.lieftink@nki.nl
▴ 40
0
votes
1
reply
1.0k
views
The issue with Report Pearson instead of Spearman
cellHTS2
cellHTS2
updated 13.7 years ago by
Wolfgang Huber
★ 13k • written 13.7 years ago by
Ning
▴ 80
0
votes
1
reply
1.0k
views
Normalization
Normalization
cellHTS2
Normalization
cellHTS2
updated 13.8 years ago by
Wolfgang Huber
★ 13k • written 13.8 years ago by
Ning
▴ 80
0
votes
1
reply
1.0k
views
cellHTS readPlateList funciton cannot find files
cellHTS2
cellHTS2
14.9 years ago
Ian Sudbery
▴ 50
0
votes
1
reply
1.0k
views
Web CellHTS2 data upload
cellhts2
upload
missing data
updated 8.3 years ago by
Joseph Barry
▴ 160 • written 8.3 years ago by
zmorehouse
• 0
0
votes
0
replies
946
views
Error in readPlateList
cellhts2
error
6.9 years ago
sil1
• 0
0
votes
1
reply
937
views
cellHTS2 - normalization with BScore (performance
cellHTS2
Normalization
updated 2.4 years ago by
Wolfgang Huber
★ 13k • written 2.4 years ago by
liebi83
• 0
0
votes
3
replies
931
views
cellHTS2: help with ConfFile (convertWellCoordinates) function
cellHTS2
cellHTS2
updated 16.2 years ago by
Wolfgang Huber
★ 13k • written 16.2 years ago by
dunicadj@tcd.ie
▴ 10
0
votes
0
replies
917
views
Navigating data in the cellHTS2 object
cellHTS2
cellHTS2
14.9 years ago
Ian Sudbery
▴ 50
0
votes
0
replies
916
views
help with defining batch slot in cellHTS2
cellHTS
cellHTS2
cellHTS
cellHTS2
15.5 years ago
yan zhou
▴ 80
0
votes
0
replies
884
views
batch info for cellHTS2
Normalization
cellHTS2
Normalization
cellHTS2
14.5 years ago
florian.hahne@novartis.com
★ 1.6k
0
votes
0
replies
882
views
[BiozzDzC] Normalizationza
Normalization
cellHTS2
Normalization
cellHTS2
13.8 years ago
casey frankenberger
▴ 10
0
votes
0
replies
833
views
cellHTS2 - 2 channel batch analysis
cellHTS2
cellHTS2
15.5 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
832
views
Specifying wells in normalization for cellHTS2
Normalization
cellHTS2
Normalization
cellHTS2
updated 16.4 years ago by
ligia@ebi.ac.uk
▴ 50 • written 16.4 years ago by
Steve Taylor
▴ 100
0
votes
0
replies
766
views
cellHTS2 - 2 channel batch analysis
cellHTS2
cellHTS2
15.6 years ago
Steve Taylor
▴ 280
0
votes
0
replies
456
views
Formatting cellHTS2 experiment
cellHTS2
2.6 years ago
yura.grabovska
▴ 30
34 results • Page
1 of 1
Recent ...
Replies
Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Dylan.Sheerin
• 0
Thank you very much, Gordon. I'll give voomLmFit a go! And for comparisons between the cohorts I presume duplicateCorrelation with standar…
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Gordon Smyth
50k
Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…
Comment: Log-cpm values from limma
by
Gordon Smyth
50k
No, it does not mean that. `voom()` uses the design matrix, including the W covariates, to compute precision weights but not to adjust the …
Comment: Extremely small p-values using Limma for proteomic data
by
Abbey
• 0
This is the code. The only part I changed was adding the contrasts.fit as you suggested. Thanks for taking a look! ``` # Load necessary …
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
Probably. I would not expect such large fold changes. But without seeing your code, who knows?
Votes
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
Answer: Extremely small p-values using Limma for proteomic data
Bioconductor 3.19 is Released!
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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