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colData
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0
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6
replies
661
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Once again a "Model matrix not full rank"
DESeq2
design
coldata
updated 6 months ago by
swbarnes2
★ 1.4k • written 6 months ago by
arfranco
▴ 130
0
votes
2
replies
788
views
Heat Map
ColData
pheatmap
DESeq2
written 16 months ago by
dania.khalid
• 0
0
votes
1
reply
1.5k
views
Rename colData column
SingleCellExperiment
colData
rename
updated 20 months ago by
Basti
▴ 780 • written 20 months ago by
achoppe
▴ 10
1
vote
0
replies
709
views
Understanding ColData in BiSeq
BiSeq
Coldata
4.4 years ago
akhaira
• 0
2
votes
2
replies
1.8k
views
How to extract factor levels of coldata from deseq object?
deseq2
levels
factor
colData
updated 5.7 years ago by
Michael Love
42k • written 5.7 years ago by
ariel
▴ 20
4
votes
8
replies
45k
views
What is colData? How do I make one?
deseq2
coldata
updated 6.0 years ago by
swbarnes2
★ 1.4k • written 6.0 years ago by
mjrarcher
▴ 10
1
vote
7
replies
3.5k
views
Data from ##SAMPLE lines in VCF?
variantannotation
coldata
updated 6.1 years ago by
Valerie Obenchain
★ 6.8k • written 6.1 years ago by
lvclark
▴ 10
0
votes
8
replies
4.1k
views
DESeq2: handling NA values in colData
deseq2
coldata
NA
updated 12 weeks ago by
Michael Love
42k • written 6.3 years ago by
t.kuilman
▴ 170
0
votes
3
replies
1.7k
views
How to create the colData for a complex experiment
multiassayexperiment
colData
updated 6.9 years ago by
Levi Waldron
★ 1.1k • written 6.9 years ago by
Lluís Revilla Sancho
▴ 760
9 results • Page
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Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Adam
• 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Comment: Problem at champ.load
by
icecreamlover
• 0
Hello! Were you able to figure this out? I am running into the same error!
Comment: ChAMP - obtaining beta values using EPICv2 annotation
by
icecreamlover
• 0
Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Adam
• 0
Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
Adam Marstrand
• 0
Thank you!
Votes
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Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
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