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Gviz: set colors for UTRs
plot
color
Gviz
utr
4.6 years ago
ginlucks
• 0
0
votes
3
replies
2.2k
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Change color of Diffbind's PCA and clustered heatmap plot()
DiffBind
plot
color
updated 5.9 years ago by
Rory Stark
★ 5.2k • written 6.0 years ago by
melnuesch
▴ 10
0
votes
4
replies
7.9k
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Limma Volcano Plot Highlight Top Genes by Color
limma
microarray
volcanoplot
color
updated 7.1 years ago by
Gordon Smyth
53k • written 7.1 years ago by
dmm204
• 0
0
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2
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2.4k
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Controlling colours assigned to order in DeSeq2 plot in phyloseq
phyloseq
color
ggplot2
updated 8.7 years ago by
Michael Love
43k • written 8.7 years ago by
sarahmacdonald86
• 0
1
vote
2
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1.5k
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How can I set custom colors in DiffBind using dba.plotHeatmap
diffbind
color
updated 9.0 years ago by
Gord Brown
▴ 670 • written 9.0 years ago by
Gary
▴ 20
0
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1
reply
1.7k
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HowTo? Provide a different fill color for each rectangle in an Gviz AnnotationTrack ?
Gviz
color
updated 9.3 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.3 years ago by
Malcolm Cook
★ 1.6k
0
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0
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1.4k
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Mixed up colors in GViz GeneRegionTrack
color
GeneRegionTrack
9.4 years ago
senanu.pearson
• 0
4
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2
replies
5.0k
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DESeq2 color coding
DESeq2
color
R package
updated 9.5 years ago by
Mike Smith
★ 6.6k • written 9.5 years ago by
ChIP-Tease
• 0
2
votes
3
replies
2.7k
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No color support in ggbio for autoplot
ggbio
autoplot
color
vignette
updated 9.8 years ago by
aaron
▴ 10 • written 9.8 years ago by
timothypyork
• 0
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Comment: upstream git branches of bioc-release
by
TrentonCollier99
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR
by
JKim
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release
by
Jeroen
▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Comment: Large logFC but somewhat high FDR
by
Gordon Smyth
53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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