Showing : continuous • reset
13
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2
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6.5k
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Using limma when continuous and categorical confounders are present at the same time (e.g.age, gender)
limma covariate continuous categorical adjustment
updated 8.8 years ago by 50k • written 8.8 years ago by • 0
1
vote
2
replies
1.4k
views
metagenomeSeq for continuous phenotype
metagenomeseq continuous limma
7.8 years ago pjgalli2 • 0
8
votes
3
replies
2.7k
views
[Limma] Testing continuous variable with interaction
limma voom continuous interactions confounding
7.6 years ago lanhuong ▴ 20
3
votes
7
replies
1.6k
views
single continuous factor
edger design matrix continuous
updated 2.2 years ago by • 0 • written 6.0 years ago by • 0
3
votes
12
replies
1.6k
views
Why did I get NA p-values in DESeq with continuous variable?
deseq2 p-value continuous deseq
5.2 years ago ariel ▴ 20
0
votes
1
reply
556
views
DESeq2 with 2 continuous factors, LRT, coeficients and slope
DESeq2 LRT continuous coeficients
updated 15 months ago by 42k • written 15 months ago by ▴ 10
0
votes
1
reply
753
views
Isolate contrasts in DESeq2 while using a combination of categorical and continuous variables
Contrast design DESeq2 continuous
updated 2.4 years ago by 42k • written 2.4 years ago by • 0
1
vote
2
replies
793
views
EdgeR -- differentially expressed genes across a continuous variable
edger continuous regression
updated 5.3 years ago by 65k • written 5.3 years ago by • 0
1
vote
2
replies
1.4k
views
WGCNA - confounding effect based on technical variables (some continuous)
WGCNA batch effect continuous
updated 5.2 years ago by ★ 3.0k • written 5.2 years ago by ▴ 20
6
votes
3
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5.5k
views
Calculating contrasts for continuous variable anad interaction effect in Limma
limma design matrix design and contrast matrix continuous interactions
updated 8.6 years ago by ★ 28k • written 8.6 years ago by ▴ 20
1
vote
2
replies
1.9k
views
RUVSEq and VSD integration
deseq2 ruvseq covariates continuous vsd
updated 8.1 years ago by 42k • written 8.1 years ago by ▴ 10
0
votes
1
reply
1.1k
views
Analyzing a continuous phenotype using DESeq2
DESeq2 continuous
7.8 years ago pjgalli2 • 0
12 results • Page 1 of 1
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Comment: More regions in union when increasing DBA$config$mergeOverlap by Ziliang • 0
I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…
Answer: SingleR Label.Ont by Denis • 0
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Comment: deseq2 results by sajadahmad41454 • 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results by swbarnes2 ★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code? by NATASHA • 0
did you find a solution? I´m having the same problem
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A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
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Comment: Log-cpm values from limma
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