Bioconductor Copywriter

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CopywriteR CopyhelpeR

17 months ago fer_talavera • 0

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877

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CopywriteR

updated 17 months ago by fer_talavera • 0 • written 3.9 years ago by Joshua • 0

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1.3k

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copywriter cnv

updated 5.4 years ago by oscarkrijgsman ▴ 20 • written 5.4 years ago by Ram ▴ 220

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1.3k

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copywriter copynumber

updated 7.0 years ago by t.kuilman ▴ 170 • written 7.0 years ago by magdaaverte • 0

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2.8k

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s4vectors copywriter

updated 7.4 years ago by Michael Lawrence ★ 11k • written 7.4 years ago by TriS ▴ 200

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2.1k

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bioconductor biocparallel copywriter

updated 8.2 years ago by Martin Morgan 25k • written 8.2 years ago by genomic8328 ▴ 10

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1.4k

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copywriter

updated 8.5 years ago by t.kuilman ▴ 170 • written 8.5 years ago by filipzembol • 0

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2.1k

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copynumber cnvtools cnv copywriteR

updated 9.1 years ago by t.kuilman ▴ 170 • written 9.1 years ago by ahinsahr11 • 0

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1.8k

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CopywriteR

9.2 years ago Tom ▴ 10

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1.8k

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copywriter bam

updated 9.3 years ago by t.kuilman ▴ 170 • written 9.3 years ago by thestaroceanster • 0

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4.6k

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copywriter

updated 9.5 years ago by t.kuilman ▴ 170 • written 9.5 years ago by jcarter • 0

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2.9k

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copywriter dnacopy

updated 9.5 years ago by t.kuilman ▴ 170 • written 9.5 years ago by jcarter • 0

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1.6k

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copywriter

9.6 years ago MatthewGField ▴ 10

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3.3k

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CopywriteR copy number

updated 9.6 years ago by t.kuilman ▴ 170 • written 9.6 years ago by smcnulty • 0

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2.5k

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copywriter slurm openMPI

updated 9.6 years ago by t.kuilman ▴ 170 • written 9.6 years ago by smcnulty • 0

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1.7k

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copywriter bin size targeted sequencing

updated 9.6 years ago by t.kuilman ▴ 170 • written 9.6 years ago by sshung • 0

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1.6k

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CopywriteR

updated 9.7 years ago by t.kuilman ▴ 170 • written 9.7 years ago by Felix • 0

17 results • Page 1 of 1

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Comment: 3-factor DESeq2 trime-series analysis by swbarnes2 ★ 1.4k

What does your PCA look like? A lot of times, I find that different cell lines are so different from each other, that they should not be d…

Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by yongjie.wang • 0

Thanks for your reply. " normFactors <- exp(-1 * offst(set2)) normFactors <- normFactors / exp(rowMeans(log(normFactors))) normalizat…

Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by Michael Love 43k

I'm not familiar with this usage, or code here ``` normFactors <- exp(-1 * offst(set2)) ``` In the RNA-seq gene-level workflow, we …

Answer: Which of apeglm and ashr may be more appropriate for pseudobulked DESeq2 analysi by Michael Love 43k

> apeglm appears much more aggressive in shrinkage, pushing many genes toward logFC = 0 > ashr maintains a gradient of shrinkage val…

Comment: voomLmFit fitted log-CPM values by Gordon Smyth 53k

The fitted values are on the log2CPM scale. I would have told you if they were not! I think you may be getting confused by the differences…

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Popular Question to Assa Yeroslaviz ★ 1.5k