Biostar Curatedmetagenomicdata

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curatedMetagenomicData

updated 4 weeks ago by Lucas Schiffer ▴ 240 • written 4 weeks ago by zachary.flamholz • 0

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220

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curatedMetagenomicData

updated 3 months ago by Lucas Schiffer ▴ 240 • written 3 months ago by ajgasparrini • 0

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367

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curatedMetagenomicData TreeSummarizedExperiment

11 months ago Davide • 0

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1.5k

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curatedmetagenomicdata

updated 3.9 years ago by Levi Waldron 1.1k • written 3.9 years ago by grp2009 • 0

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1.5k

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software error curatedmetagenomicdata annotationhub experimenthub

updated 5.6 years ago by Levi Waldron 1.1k • written 5.6 years ago by morganx ▴ 10

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830

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biocparallel curatedmetagenomicdata parallel dplyr

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by Lucas Schiffer ▴ 240

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932

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ExperimentHub curatedMetagenomicData

updated 5.7 years ago by Lucas Schiffer ▴ 240 • written 5.8 years ago by Wolfgang Huber 13k

7 results • Page 1 of 1

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Answer: spot- vs cell-level data access by Leonardo Collado Torres ▴ 980

Hi, The `SingleCellExperiment` object you can download with `fetch_data(type = "sce")` pre-dates the creation of `SpatialExperiment`. No…

Answer: unable to install.packages("spatialLIBD") by Leonardo Collado Torres ▴ 980

Hi @kstern, Thank you for your interest in `spatialLIBD`. You will still need the package in order to re-cast the object into a `Spatia…

Comment: Question regarding averaging DESeq2 results. by e.v.egeland • 0

Thanks for your quick reply, Wolfgang. Your answer does cover the essence of my question. I did initially apply both approaches discussed …

Comment: unable to install.packages("spatialLIBD") by shepherl 3.2k

I guess it depends on what you mean by only getting the datasets? You can clone the package with `git clone https://git.bioconductor.org/p…

Comment: Which is the best type of data for correlation or survival analysis by Yang Shi • 0

Thanks for your reply and your excellent package! Could you please tell me the **difference bwtween vst transformed data and the "vtd" base…

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C: No genes found in universe : goana error

A: No genes found in universe : goana error

No genes found in universe : goana error

Answer: Pathview unable to download pathways

Comment: Which is the best type of data for correlation or survival analysis

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