Bioconductor Deconvolution

Showing : deconvolution • reset

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1.2k

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deconvolution r scRNAseq bioinformatics

2.2 years ago Hasan Alanya • 0

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1.0k

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deconvolution rnaseq psea

6.3 years ago WouterDeCoster ▴ 130

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908

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deconvolution methods

6.3 years ago casey.rimland ▴ 150

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1.1k

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deseq2 deconvolution rnaseq

updated 5.9 years ago by Michael Love 42k • written 5.9 years ago by jennyl.smith12 • 0

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1.3k

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deseq2 deconvolution normalization limma

updated 5.3 years ago by Michael Love 42k • written 5.3 years ago by bruce.moran ▴ 30

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745

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limma microarray deconvolution cell type

updated 4.2 years ago by Gordon Smyth 50k • written 4.2 years ago by antgomo • 0

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882

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methylCC deconvolution methylation dmrseq serum

4.1 years ago marcin.bazyliszek • 0

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655

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PSEA Deconvolution

3.9 years ago kavator ▴ 30

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1.6k

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deconvolution cellmix

8.9 years ago carleshf ▴ 10

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922

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Deconvolution

2.5 years ago Barista • 0

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2.2k

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deconvolution rna-seq

updated 8.6 years ago by Steve Lianoglou ★ 13k • written 8.6 years ago by Pauly Lin ▴ 150

11 results • Page 1 of 1

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Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0

Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Comment: deseq2 results by swbarnes2 ★ 1.3k

Cross-posted https://www.biostars.org/p/9594331/#9594458

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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Teacher to Michael Love 42k