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Deconvolution
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544
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Cell type deconvolution of RNAseq data- Create signature matrix of cells
deconvolution
rnaseqGene
RNAseq
10 months ago
JG13
• 0
2
votes
2
replies
1.8k
views
How to deal with Expression set assembly problem?
deconvolution
r
scRNAseq
bioinformatics
3.3 years ago
Hasan Alanya
• 0
0
votes
0
replies
1.3k
views
Best deconvolution method
Deconvolution
3.5 years ago
Barista
• 0
0
votes
1
reply
871
views
PSEA deconvolution; some of the coefficient is NA?
PSEA
Deconvolution
4.9 years ago
kavator
▴ 30
0
votes
0
replies
1.2k
views
Deconvolution methods from WGBS data (methylation)
methylCC
deconvolution
methylation
dmrseq
serum
5.1 years ago
marcin.bazyliszek
• 0
0
votes
2
replies
1.0k
views
csSAMfit with covariates
limma
microarray
deconvolution
cell type
updated 5.2 years ago by
Gordon Smyth
52k • written 5.2 years ago by
antgomo
• 0
0
votes
4
replies
1.6k
views
varianceStabilizingTransformation for clustering, deconvolution
deseq2
deconvolution
normalization
limma
updated 6.3 years ago by
Michael Love
43k • written 6.3 years ago by
bruce.moran
▴ 30
0
votes
0
replies
1.2k
views
Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution
methods
7.3 years ago
casey.rimland
▴ 170
1
vote
1
reply
1.3k
views
Expression deconvolution using PSEA: applicable to RNA-seq?
deconvolution
rnaseq
psea
7.3 years ago
WouterDeCoster
▴ 130
1
vote
1
reply
3.2k
views
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
deconvolution
rna-seq
updated 9.6 years ago by
Steve Lianoglou
★ 13k • written 9.6 years ago by
Pauly Lin
▴ 160
0
votes
0
replies
1.8k
views
CellMix - Custom matrix with Abbas signature
deconvolution
cellmix
9.9 years ago
carleshf
▴ 10
11 results • Page
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Answer: GSVA 1.52.2 (new API) nb of workers?
by
chaneymiller5908958
• 0
@[block blast][1] I'm running into the same issue with the parallelization. [1]: https://blockblastonline.com
Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove
by
macdonaldfrench7286566
• 0
Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an
by
Kateřina
• 0
I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!
Comment: GAlignments Cigar to GRanges
by
pineiroalejandro
• 0
Wow, so easy! Thanks for your quick reply.
Comment: EuroBioC2023 abstract submission is open!
by
eilishhill8
• 0
Thanks for sharing this. I got it clearly now. Submit here: [https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/][1] [melon sa…
Votes
Answer: GAlignments Cigar to GRanges
Answer: GAlignments Cigar to GRanges
When running contrasts, does it use normalized read counts?
When running contrasts, does it use normalized read counts?
Importing Salmon counts with tximport with host and virus genomes
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