Bioconductor Dependencies

Showing : dependencies • reset

votes

replies

6.0k

views

parathyroidse package installation dependencies

updated 7.9 years ago by Hervé Pagès 16k • written 7.9 years ago by mmalek • 0

vote

replies

2.2k

views

scde ubuntu dependencies R

updated 7.2 years ago by Martin Morgan 25k • written 7.2 years ago by aditya531996 • 0

vote

replies

939

views

versions BiocVersion dependencies

updated 3.1 years ago by shepherl 3.9k • written 3.1 years ago by sohitmiglani • 0

vote

replies

1.7k

views

rhdf5 hdf5 dependencies

updated 7.8 years ago by Mike Smith ★ 6.5k • written 7.8 years ago by thabermann • 0

votes

replies

2.3k

views

deseq2 ubuntu edger dependencies

7.2 years ago aditya531996 • 0

vote

1.3k

views

package installation dependencies bagfootr bagfoot

updated 6.5 years ago by Sean Davis 21k • written 6.5 years ago by rbronste ▴ 60

votes

2.7k

views

annotationhub dependencies

8.4 years ago dalloliogm ▴ 50

vote

855

views

dependencies error

updated 6.4 years ago by Aaron Lun ★ 28k • written 6.4 years ago by ericaugustoito • 0

votes

1.0k

views

cran package development dependencies

updated 5.5 years ago by Peter Langfelder ★ 3.0k • written 5.5 years ago by bjgrant • 0

votes

921

views

R package dependencies

updated 5.1 years ago by Aaron Lun ★ 28k • written 5.1 years ago by MAPK • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of unavailability.…

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

Awards • All

Scholar to ATpoint ★ 4.1k