Bioconductor Ebayes

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1.9k

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topTable MicroarrayData ebayes limma Microarray

4.6 years ago snijesh ▴ 200

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1.9k

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limma eBayes decideTests topTable

updated 5.6 years ago by Gordon Smyth 53k • written 5.6 years ago by irene.roman • 0

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2.6k

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limma eBayes

updated 6.6 years ago by Gordon Smyth 53k • written 6.6 years ago by Sebastian Hesse ▴ 70

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2.2k

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Limma ebayes bayesian ls

updated 17 months ago by Gordon Smyth 53k • written 7.0 years ago by CantExitVIM ▴ 10

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2.2k

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model.matrix lmFit eBayes GEOquery limma

7.6 years ago darthratus • 0

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1.8k

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ebayes limma bioconductor

updated 7.9 years ago by Gordon Smyth 53k • written 7.9 years ago by reventropy2003 ▴ 10

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2.8k

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ebayes limma

8.0 years ago peirinl • 0

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2.0k

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eBayes limma error

updated 8.2 years ago by James W. MacDonald 68k • written 8.2 years ago by calen.p.ryan • 0

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1.9k

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ebayes limma voom

8.6 years ago bag59 • 0

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2.4k

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limma ebayes

updated 2.5 years ago by Gordon Smyth 53k • written 8.7 years ago by cemcdono • 0

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1.2k

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limma ebayes

updated 9.9 years ago by Aaron Lun ★ 29k • written 9.9 years ago by bharata1803 ▴ 60

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2.1k

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limma ebayes statistical inference

updated 10.1 years ago by Gordon Smyth 53k • written 10.2 years ago by ssrajan86 • 0

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1.6k

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limma eset error ebayes

updated 10.2 years ago by James W. MacDonald 68k • written 10.2 years ago by Vani ▴ 20

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2.3k

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ebayes expression affymetrix pd.hugene.2.0.st limma

updated 10.7 years ago by Gordon Smyth 53k • written 10.7 years ago by Paulo Nuin ▴ 200

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Comment: Error Loading Experiment from SimBenchData Package by ATpoint ★ 4.9k

Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…

Answer: Help with defining groups by Gordon Smyth 53k

Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…

Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760

The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0

Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k

I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …

Votes

Answer: ordinary t from limma [was: How would I normally compare swirl?]

Comment: readDNAStringSet with non DNA characters

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

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