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ensembl mart
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862
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News:
Ensembl 93 is out!
ensembl mart
ensembl93
biomart
news
News
5.8 years ago
amonida
▴ 20
1
vote
4
replies
1.6k
views
biomaRt scan error for latest assembly when indicating version Number
biomart
rstudio
ensembl mart
updated 6.2 years ago by
Mike Smith
★ 6.5k • written 6.2 years ago by
mullpaul
• 0
3
votes
14
replies
3.7k
views
biomaRt - Error in getBM: The query to the BioMart webservice returned an invalid result
biomart
error
ensembl
bioconductor
ensembl mart
6.9 years ago
daniel.carbajo
• 0
2
votes
12
replies
2.9k
views
biomaRt does not return entrezgene id
bioconductor
biomart
entrez gene identifiers
ensembl
ensembl mart
updated 7.1 years ago by
Thomas Maurel
▴ 800 • written 7.1 years ago by
daniel.carbajo
• 0
5
votes
5
replies
2.0k
views
News:
Ensembl 88 is out!
ensembl
ensembl mart
biomart
e!88
News
7.1 years ago
Thomas Maurel
▴ 800
0
votes
0
replies
1.1k
views
News:
Ensembl 87 is out!
ensembl
ensemble mart
ensembl mart
biomart
News
7.4 years ago
amonida
▴ 20
1
vote
1
reply
1.2k
views
News:
Ensembl release 86 is out!
ensembl
biomart
ensembl release
ensembl mart
News
7.6 years ago
Thomas Maurel
▴ 800
7 results • Page
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Comment: Help with running egsea()
by
James W. MacDonald
65k
I don't understand the last question, but do look at the msigdb.gsets argument to `buildIdx` in the help page for that function.
Votes
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
Answer: How to save the DEXSeq results
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