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ensemble mart
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reset
6
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1
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1.3k
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biomart R code cannot retrieve gene symbol
biomart
ensemblbiomart
ensemble mart
6.1 years ago
emmak
▴ 20
0
votes
0
replies
1.1k
views
News:
Ensembl 87 is out!
ensembl
ensemble mart
ensembl mart
biomart
News
7.4 years ago
amonida
▴ 20
0
votes
2
replies
1.1k
views
ENSEMBL_MART_FUNCGEN not accessible through biomaRt?
biomart
regulatory
ensemble mart
ensembldb
updated 7.9 years ago by
Thomas Maurel
▴ 800 • written 7.9 years ago by
Sigve Nakken
▴ 50
3
votes
3
replies
1.5k
views
Premature EOF within Description Field - Bos Taurus
biomart
ensemble mart
updated 8.0 years ago by
Martin Morgan
25k • written 8.0 years ago by
andrew.j.skelton73
▴ 370
0
votes
0
replies
1.2k
views
Low yield mapping ensembl transcript ids to entrez gene ids in biomart
biomart
ensembl
ensemble mart
entrez gene identifiers
8.2 years ago
serpalma.v
▴ 60
0
votes
0
replies
1.6k
views
News:
Ensembl 83 is out!
ensemble mart
ensembl
biomart
ensembl release
News
8.4 years ago
amonida
▴ 20
1
vote
3
replies
2.4k
views
getSequence from biomaRt but Error in martCheck
R
biomart
ensemble mart
updated 8.5 years ago by
Hervé Pagès
16k • written 8.5 years ago by
Gabriela Santos
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
Sorry, for questions about statistical analysis plan and interpretation of results, I recommend to work with a local statistician or someon…
Answer: Fold change calculation in Diffbind vs. DESEQ2?
by
Michael Love
41k
There was a recent DiffBind question on the support site that noticed the same thing, try searching recent DiffBind posts.
Answer: Timecourse RNASeq analysis
by
Michael Love
41k
There are many choices for time course, and we have an example in our workflow (rnaseqGene). Otherwise, I recommend to consult a local …
Answer: Padj "NA" with thousands of low count although the raw read counts are quite lar
by
Michael Love
41k
You can either turn off independent filtering in `results` or use `ihw` see the vignette.
Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Thanks Gordon for a detail guide! You have a great memory of time. GSVA also do differential express at pathway level (https://bioconductor…
Votes
Comment: Why p value inconsistent when using different number of pathway score?
Nominations for Bioconductor Awards 2024!
Answer: Improving the design matrices vignette in RNAseq123
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
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