Bioconductor Epicv2

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1.4k

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EPICv2 EPICv2manifest

10 months ago Joshua Llano • 0

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4.7k

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EpicV2 ChAMPdata

updated 14 months ago by icecreamlover • 0 • written 15 months ago by nurkenber • 0

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3.9k

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ChAMP EPICv2

updated 15 months ago by Ricky • 0 • written 2.6 years ago by medha.suman • 0

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501

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EpicV2 DMRcate

15 months ago kitzhu • 0

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2.6k

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sesame EPICv2manifest epicv2

updated 6 months ago by MargaretJDinan • 0 • written 19 months ago by luca.s ▴ 50

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2.5k

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sesameData EPICv2 EPICv1

updated 7 months ago by Mancy • 0 • written 19 months ago by archibold.mposhi • 0

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1.2k

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limma DMRcate MethylationArray EPICV2

updated 20 months ago by Gordon Smyth 53k • written 21 months ago by Kim • 0

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2.3k

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DNAMethylation GO MethylationArray missMethyl EPICv2

23 months ago • updated 16 months ago s.malik • 0

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2.7k

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DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 23 months ago by James W. MacDonald 68k • written 23 months ago by rae.alshammari ▴ 20

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3.7k

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ChAMP EPICv2

updated 14 months ago by icecreamlover • 0 • written 2.0 years ago by ChunkyJones • 0

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2.4k

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sesame IlluminaHumanMethylationEPICv2anno.20a1.hg38 methylationEPICv2.0 EpicV2

updated 22 months ago by aldea85 • 0 • written 2.2 years ago by Courtney ▴ 10

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3.5k

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minfiDataEPIC EpicV2

updated 2.3 years ago by Zuguang Gu ▴ 290 • written 2.4 years ago by Izabela.ams ▴ 10

12 results • Page 1 of 1

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Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

Cool, glad to hear I wasn't missing some functionality in DESeq2. I don't know that much about the differences between DESeq2 vs edgeR; my …

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k

Yes, so for one thing, note that Gordon has provided code for doing what you are asking in edgeR, which you can go ahead and use. You aske…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

I don't think DESeq2 has the ability to do multi-contrast comparisons, at least based on what I can understand of the manual; I can pick mu…

Comment: Upcoming Ensembl API and data access changes - new blog post available by Hugo Gruson • 0

Thanks for the update. To be very explicit: what is going to happen to the Biomart service, on which the biomaRt bioconductor package relie…

Comment: Are individual-mouse-based statistics possible in CellChat? by LillianaVolkman99 • 0

thank you very much. https://www.biostars.org/p/9617271/

Votes

A: DESeq2: Is it possible to convert read counts to expression values via TPM and r

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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