Bioconductor Exon array analysis

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629

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pd.huex.1.0.st.v2 exon array analysis

updated 4.6 years ago by James W. MacDonald 63k • written 4.6 years ago by GENOMIC_region • 0

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691

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exons exon array analysis

updated 4.6 years ago by James W. MacDonald 63k • written 4.6 years ago by GENOMIC_region • 0

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1.1k

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differential exon usage exon array analysis annotation hta2.0 diffsplice

updated 5.7 years ago by James W. MacDonald 63k • written 5.7 years ago by relathman ▴ 20

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1.3k

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onechannelgui exon array analysis R

7.6 years ago anna.dolnik • 0

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2.5k

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oligo exon array analysis

updated 8.0 years ago by Marc Carlson ★ 7.2k • written 8.0 years ago by Elena Serrano ▴ 30

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997

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exomecopy exon array analysis CODEX

8.1 years ago kaushal Raj Chaudhary ▴ 10

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3.1k

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affymetrixchip GenechipHumanTranscriptomeArray2.0 exon array analysis

8.2 years ago svlachavas ▴ 810

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4.8k

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exonmap exon array analysis bioconductor

8.3 years ago svlachavas ▴ 810

8 results • Page 1 of 1

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Comment: Question on constructing design matrix and defining contrasts for analysis by mohammedtoufiq91 ▴ 10

@gordonsmyth thank you, yes, please find the targets frame below. Basically, I want to create a design matrix and binarize by 0 and 1 to be…

Comment: WGCNA: many over and under-expressed features in modules of a signed network by andres.firrincieli ▴ 50

answered in Biostars: https://www.biostars.org/p/9564943/

Comment: Multitasking and Rbwa by Jean-Philippe Fortin • 0

Indeed, one can pass additional arguments to the `bwa_aln` function in `Rbwa`: bwa_aln(type="single", index_prefix=index_pr…

Comment: biomaRt error: database disk image is malformed by Emile • 0

UNBORKING the bioMaRt cache `biomaRt::biomartCacheClear()` also fixes the troubles with PANTHER.db installation which have also something t…

Answer: Proteomics data with NA values by Laurent Gatto 1.6k

- First, you need to assess how many missing values you have. - I would recommend not to impute your data by 0 (or any arbitrary small …

Votes

Answer: Question on constructing design matrix and defining contrasts for analysis

WGCNA: many over and under-expressed features in modules of a signed network

Comment: WGCNA: many over and under-expressed features in modules of a signed network

Answer: DESeq2 or edgeR for Presence and Absence of Proteins

Answer: Normalized counts from LRT or Wald test?

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Teacher to James W. MacDonald 63k