Bioconductor Genbankr

Showing : genbankr • reset

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674

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genbankr

3.9 years ago Lauren • 0

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2.7k

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genbankr

updated 4.8 years ago by Nicholas Cooley • 0 • written 4.8 years ago by heiko_kin ▴ 60

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1.9k

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granges genomic ranges genbankr ensembldb

updated 4.9 years ago by James W. MacDonald 68k • written 4.9 years ago by biomiha ▴ 20

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928

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genbankr parsing

5.4 years ago sean.c.m.booth • 0

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902

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genbankr

6.1 years ago jeyp • 0

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1.1k

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genbankr parseGenBank gbk error

6.2 years ago ashley.dederich • 0

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1.1k

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genbankr genbank annotation

7.1 years ago story.benjamin ▴ 20

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1.4k

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genbankr

updated 7.5 years ago by becker.gabriel ▴ 10 • written 7.8 years ago by Monther Alhamdoosh ▴ 40

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1.3k

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genbankr

updated 7.5 years ago by becker.gabriel ▴ 10 • written 7.7 years ago by inookaew • 0

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1.8k

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genbankr

updated 8.8 years ago by becker.gabriel ▴ 10 • written 8.8 years ago by Thomas Sandmann ▴ 90

10 results • Page 1 of 1

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Answer: Help with defining groups by Gordon Smyth 53k

Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…

Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760

The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0

Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k

I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …