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genbankr
•
reset
0
votes
0
replies
685
views
genbankr throwing C stack usage error when reading in files >500Kb
genbankr
3.9 years ago
Lauren
• 0
0
votes
3
replies
2.7k
views
Retrieve GenBank file using RefSeq ID
genbankr
updated 4.8 years ago by
Nicholas Cooley
• 0 • written 4.8 years ago by
heiko_kin
▴ 60
0
votes
4
replies
1.9k
views
Gene information (GRanges + sequence) to GenBank
granges
genomic ranges
genbankr
ensembldb
updated 5.0 years ago by
James W. MacDonald
68k • written 5.0 years ago by
biomiha
▴ 20
0
votes
0
replies
940
views
readGenbank can't handle multiple contigs?
genbankr
parsing
5.4 years ago
sean.c.m.booth
• 0
0
votes
0
replies
911
views
genbankr problem while parsing gb file
genbankr
6.1 years ago
jeyp
• 0
0
votes
0
replies
1.1k
views
Error in parseGenBank
genbankr
parseGenBank
gbk
error
6.3 years ago
ashley.dederich
• 0
0
votes
2
replies
1.1k
views
Pulling Genbank Annotation Information via library(genbankr)
genbankr
genbank
annotation
7.2 years ago
story.benjamin
▴ 20
0
votes
1
reply
1.4k
views
genbankr fails when reading GBK file
genbankr
updated 7.6 years ago by
becker.gabriel
▴ 10 • written 7.9 years ago by
Monther Alhamdoosh
▴ 40
0
votes
1
reply
1.3k
views
problem with genbankr
genbankr
updated 7.6 years ago by
becker.gabriel
▴ 10 • written 7.7 years ago by
inookaew
• 0
2
votes
1
reply
1.8k
views
Importing genbank entries for synthetic constructs
genbankr
updated 8.9 years ago by
becker.gabriel
▴ 10 • written 8.9 years ago by
Thomas Sandmann
▴ 90
10 results • Page
1 of 1
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Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
dzv20413
• 0
Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…
Comment: Memory error while running alignments
by
Erik Wright
▴ 150
How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…
Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
Gabriel
• 0
Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …
Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
by
ubjw24
• 0
Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…
Comment: DESeq2 design for haplotype MPRA
by
Rita
• 0
Thank you very much, I appreciate it!
Votes
Comment: Check removeBatchEffect effectiveness
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
Answer: DESeq2 design for haplotype MPRA
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
Comment: Check removeBatchEffect effectiveness
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