Bioconductor Genbankr

Showing : genbankr • reset

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685

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genbankr

3.9 years ago Lauren • 0

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2.7k

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genbankr

updated 4.8 years ago by Nicholas Cooley • 0 • written 4.8 years ago by heiko_kin ▴ 60

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1.9k

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granges genomic ranges genbankr ensembldb

updated 5.0 years ago by James W. MacDonald 68k • written 5.0 years ago by biomiha ▴ 20

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941

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genbankr parsing

5.4 years ago sean.c.m.booth • 0

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911

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genbankr

6.1 years ago jeyp • 0

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1.1k

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genbankr parseGenBank gbk error

6.3 years ago ashley.dederich • 0

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1.1k

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genbankr genbank annotation

7.2 years ago story.benjamin ▴ 20

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1.4k

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genbankr

updated 7.6 years ago by becker.gabriel ▴ 10 • written 7.9 years ago by Monther Alhamdoosh ▴ 40

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1.3k

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genbankr

updated 7.6 years ago by becker.gabriel ▴ 10 • written 7.7 years ago by inookaew • 0

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1.8k

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genbankr

updated 8.9 years ago by becker.gabriel ▴ 10 • written 8.9 years ago by Thomas Sandmann ▴ 90

10 results • Page 1 of 1

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Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by dzv20413 • 0

Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…

Comment: Memory error while running alignments by Erik Wright ▴ 150

How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…

Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by Gabriel • 0

Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …

Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by ubjw24 • 0

Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…

Comment: DESeq2 design for haplotype MPRA by Rita • 0

Thank you very much, I appreciate it!

Votes

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

A: Different logFC (log2foldchange) values for genes from limma-voom and other too

Comment: Check removeBatchEffect effectiveness

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