Bioconductor Gene set enrichment

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gsva plage differential expression gene set enrichment

7.0 years ago krassowski.michal ▴ 40

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2.1k

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camera limma gene set analysis gene set enrichment

updated 7.1 years ago by Gordon Smyth 53k • written 7.1 years ago by emeline.perthame • 0

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1.5k

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gene set analysis gene set enrichment limma

updated 7.2 years ago by Gordon Smyth 53k • written 7.2 years ago by jaynishshah • 0

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1.6k

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gene set enrichment KEGG

updated 7.8 years ago by Lluís Revilla Sancho ▴ 760 • written 7.8 years ago by RMRG ▴ 10

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2.5k

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limma edger barcodeplot gene set enrichment mroast

updated 7.9 years ago by Gordon Smyth 53k • written 7.9 years ago by srmaruyama • 0

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3.8k

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limma goana gene set enrichment

8.1 years ago emy_66 • 0

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4.7k

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DOSE clusterprofiler annotation gene ontology gene set enrichment

updated 8.1 years ago by Guangchuang Yu ★ 1.2k • written 8.1 years ago by kirannbishwa01 ▴ 20

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1.6k

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gene ontology go analysis gene set enrichment gene set analysis News

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by triZZla • 0

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3.3k

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limma camera gene set analysis gene set enrichment

updated 8.9 years ago by Gordon Smyth 53k • written 8.9 years ago by natalia.pietrosemoli • 0

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3.3k

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topgo gene ontology gene set enrichment rna-seq bioinformatics

updated 8.9 years ago by Lluís Revilla Sancho ▴ 760 • written 9.2 years ago by fromhj304 ▴ 10

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3.0k

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rna-seq bioinformatics gene ontology gene set enrichment go

updated 9.2 years ago by Guangchuang Yu ★ 1.2k • written 9.2 years ago by fromhj304 ▴ 10

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Comment: nice 3D displays for PCA analysis by adam80haynes • 0

That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…

Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0

The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …

Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0

If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…

Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

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Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

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