Bioconductor GenomicInteractions

Showing : genomicInteractions • reset

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genomicinteractions

6.7 years ago sarvesh.nikumbh ▴ 10

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GenomicInteractions gviz

updated 4.3 years ago by liz.ingsimmons ▴ 140 • written 4.3 years ago by Marco Blanchette ▴ 30

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gviz genomicinteractions

8.1 years ago enricoferrero ▴ 660

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genomicinteractions gviz interactionset

updated 5.4 years ago by liz.ingsimmons ▴ 140 • written 5.4 years ago by ferbecneu • 0

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GenomicInteractions Gviz

updated 5.0 years ago by liz.ingsimmons ▴ 140 • written 5.0 years ago by Nik dAK ▴ 10

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genomicInteractions annotation

updated 4.9 years ago by liz.ingsimmons ▴ 140 • written 5.0 years ago by ls760 • 0

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GenomicInteractions

updated 8.4 years ago by Malcolm Perry ▴ 40 • written 8.4 years ago by tangming2005 ▴ 190

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genomicinteractions GRanges

updated 8.3 years ago by liz.ingsimmons ▴ 140 • written 8.3 years ago by tangming2005 ▴ 190

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duplicate GenomicInteractions

4.0 years ago dogancan • 0

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diffHic GenomicInteractions edgeR HiC cooler

updated 3.7 years ago by Aaron Lun ★ 28k • written 3.7 years ago by Marco Blanchette ▴ 30

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InteractionSet subsetByOverlaps GenomicInteractions

10 months ago LaureTomas ▴ 10

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GenomicInteractions

4.2 years ago chang.jiaming • 0

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GenomicInteractions Basic4Cseq DNASeq GenomicFiles

2.9 years ago koushik • 0

13 results • Page 1 of 1

Recent ...

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Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720

Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …

Comment: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k

We have some text about this particular question in the Frequently Asked Questions (FAQ) part of the software vignette.

Answer: How to run allelic imbalance in apeglm by Michael Love 42k

You can put 1 / 1 for the ratio when you are missing counts and then set the weight for that matrix cell to 1e-6. Let me know if that's …

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Got you. Thanks again for your comments.

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

Thanks so much for your comment. Yes, this makes sense to me, especially since the effect of the drug is subtle. But it raises a larger con…

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Comment: DESeq2- Mysterious interaction suppresses DEGs

Answer: DESeq2- Mysterious interaction suppresses DEGs

Answer: Subsetting RNAseq data | voomaByGroup()

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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