Bioconductor Genomicinteractions

Showing : genomicinteractions • reset

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gviz genomicinteractions

8.1 years ago enricoferrero ▴ 660

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GenomicInteractions

updated 8.4 years ago by Malcolm Perry ▴ 40 • written 8.4 years ago by tangming2005 ▴ 190

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diffHic GenomicInteractions edgeR HiC cooler

updated 3.7 years ago by Aaron Lun ★ 28k • written 3.7 years ago by Marco Blanchette ▴ 30

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GenomicInteractions Gviz

updated 5.0 years ago by liz.ingsimmons ▴ 140 • written 5.0 years ago by Nik dAK ▴ 10

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genomicinteractions

6.7 years ago sarvesh.nikumbh ▴ 10

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genomicinteractions gviz interactionset

updated 5.4 years ago by liz.ingsimmons ▴ 140 • written 5.4 years ago by ferbecneu • 0

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genomicinteractions GRanges

updated 8.2 years ago by liz.ingsimmons ▴ 140 • written 8.2 years ago by tangming2005 ▴ 190

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GenomicInteractions gviz

updated 4.2 years ago by liz.ingsimmons ▴ 140 • written 4.2 years ago by Marco Blanchette ▴ 30

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duplicate GenomicInteractions

4.0 years ago dogancan • 0

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816

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GenomicInteractions

4.1 years ago chang.jiaming • 0

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776

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genomicInteractions annotation

updated 4.9 years ago by liz.ingsimmons ▴ 140 • written 4.9 years ago by ls760 • 0

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619

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GenomicInteractions Basic4Cseq DNASeq GenomicFiles

2.9 years ago koushik • 0

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440

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InteractionSet subsetByOverlaps GenomicInteractions

10 months ago LaureTomas ▴ 10

13 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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