Showing : genvisr • reset
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GenVisR - adding on genomic positions to CovGen graph
GenVisR GenCov
3.3 years ago Amy_ • 0
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10
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4.3k
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error in package GenVisR while installing
GenVisR GenVis
updated 2.2 years ago by ▴ 30 • written 3.5 years ago by • 0
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1.8k
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Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 3.6 years ago by 16k • written 3.6 years ago by • 0
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2.9k
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How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR maftools
3.6 years ago e • 0
0
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1
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1.7k
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Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants waterfall GenVisR
updated 5.2 years ago by ▴ 30 • written 5.2 years ago by ▴ 10
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1
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1.1k
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Adding layer to legend in waterfall plot
GenVisR ggplot2 waterfall
6.3 years ago sheneicechang • 0
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1.3k
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Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
6.3 years ago sheneicechang • 0
0
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1
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1.6k
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how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr genvisr waterfall mutation
updated 7.1 years ago by ▴ 30 • written 7.2 years ago by • 0
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1
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1.2k
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Issues with lohSpec
genvisr lohSpec
7.5 years ago dharia.priyadarshani • 0
0
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2
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1.8k
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Copy Number plot cnSpec - how to order samples
genvisr
7.6 years ago cedric.vmdl • 0
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4
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2.9k
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GenVisR- cnSpec CNV plot
GenVisR
8.0 years ago daijieqiong ▴ 10
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2
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1.7k
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an error in TvTi: package GenVisR
GenVisR
updated 9.0 years ago by ▴ 30 • written 9.0 years ago by ▴ 670
2
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5
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3.5k
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GenVisR Installation error message
genvisR
9.9 years ago Deep Adhya ▴ 20
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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k
Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/
Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k
apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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