Bioconductor Gff3

Showing : gff3 • reset

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dexseq python gtf gff3 annotation

5.8 years ago Raito92 ▴ 60

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annotation gff3 gff genome

updated 6.5 years ago by Michael Lawrence ★ 11k • written 6.5 years ago by mictadlo ▴ 10

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parclip bedtools bed files gff3

8.1 years ago linuxborg2 • 0

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txdb gff3 polycistronic transcript

8.3 years ago Piotr Gawronski • 0

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4.2k

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GenomicFeatures GFF3

updated 8.9 years ago by Valerie Obenchain ★ 6.8k • written 8.9 years ago by Dario Strbenac ★ 1.6k

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4.7k

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AnnotationHub Gencode GFF3 FASTA News

10.5 years ago Sonali Arora ▴ 390

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Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0

Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0

Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k

As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…

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Answer: Can sample-level weights be used when analysing GSVA scores in limma?

Comment: Can sample-level weights be used when analysing GSVA scores in limma?

Answer: Issue loading and downloading Bioconductor 3.22 packages after update

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Scholar to Gordon Smyth 53k

Popular Question to Dario Strbenac ★ 1.6k

Popular Question to chirag.parsania ▴ 10