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globaltest
•
reset
0
votes
2
replies
559
views
I want to use global test.
gene
r
clst
rpy
globaltest
22 months ago
Kim
• 0
0
votes
0
replies
648
views
Testing a gene set with globaltest
globaltest
5.6 years ago
Lluís Revilla Sancho
▴ 700
0
votes
0
replies
704
views
User defined gene or metabolite set in globaltest
globaltest
gene set
6.1 years ago
the_august
• 0
0
votes
0
replies
814
views
Yeast ORF gene set analysis with globaltest (gtKEGG)
globaltest
saccharomyces cerevisiae
gtKEGG
KEGG
gene set analysis
6.5 years ago
Rebecca Ong
• 0
0
votes
3
replies
1.9k
views
Annotation in ExpressionSet object
ExpressionSet
globaltest
6.7 years ago
NS
▴ 60
0
votes
0
replies
764
views
How to use CP:REACTOME subcategory under category C2 in Broad list (globaltest)
globaltest
6.9 years ago
Aditya Saxena
▴ 10
0
votes
2
replies
2.2k
views
[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure
Cancer
Biobase
tkWidgets
globaltest
BiocInstaller
BiocGenerics
Cancer
updated 9.8 years ago by
Martin Morgan
25k • written 9.8 years ago by
Shields, Rusty IMS
▴ 40
0
votes
0
replies
714
views
globaltest 5.6.1 bug fix
Survival
globaltest
Survival
globaltest
11.5 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
0
replies
753
views
globaltest 5.0.2
Survival
globaltest
Survival
globaltest
13.0 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
0
replies
596
views
bug fix in globaltest
globaltest
globaltest
13.1 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
1
reply
778
views
globaltest mulitple testing correction
Pathways
globaltest
Pathways
globaltest
updated 14.3 years ago by
Claus Mayer
▴ 340 • written 14.3 years ago by
mpg33@drexel.edu
▴ 90
0
votes
1
reply
884
views
global test multiple testing correction
Pathways
globaltest
Pathways
globaltest
updated 14.3 years ago by
DEBASHIS GHOSH
▴ 40 • written 14.3 years ago by
Michael Gormley
▴ 60
0
votes
0
replies
2.8k
views
topGO enrichment using ensembl gene list
Microarray
Annotation
GO
PROcess
globaltest
topGO
Microarray
Annotation
GO
PROcess
topGO
14.8 years ago
Adrian Alexa
▴ 400
0
votes
1
reply
873
views
globaltest - multinomial model
Survival
affy
vsn
limma
globaltest
affyio
Survival
affy
vsn
limma
globaltest
affyio
updated 15.5 years ago by
Goeman, J.J. MSTAT
▴ 150 • written 15.5 years ago by
Hans-Ulrich Klein
▴ 330
0
votes
1
reply
738
views
globaltest
Pathways
globaltest
Pathways
globaltest
updated 15.9 years ago by
Oosting, J. PATH
▴ 550 • written 15.9 years ago by
Caroline Reiff
▴ 40
0
votes
8
replies
1.4k
views
AnnBuilder and Kegg
Pathways
GO
Survival
Cancer
Organism
annotate
affydata
vsn
AnnBuilder
globaltest
GO
vsn
updated 16.2 years ago by
David Lapointe
▴ 170 • written 16.2 years ago by
John Zhang
★ 2.9k
0
votes
0
replies
818
views
globaltest: pairwise design?
globaltest
globaltest
16.3 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
0
replies
599
views
geneplot problem
GO
globaltest
GO
globaltest
16.7 years ago
Dario Greco
▴ 310
0
votes
0
replies
726
views
globaltest covariates problem
globaltest
globaltest
17.1 years ago
Dario Greco
▴ 310
0
votes
3
replies
1.1k
views
R: Pathway Information
Genetics
Pathways
Cancer
probe
globaltest
Genetics
Pathways
Cancer
probe
globaltest
updated 17.6 years ago by
Alberto Goldoni
▴ 360 • written 17.6 years ago by
John Zhang
★ 2.9k
0
votes
0
replies
796
views
globaltest procedure
Pathways
Survival
globaltest
Pathways
Survival
globaltest
17.9 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
1
reply
907
views
Globaltest
globaltest
globaltest
updated 18.0 years ago by
Oosting, J. PATH
▴ 550 • written 18.0 years ago by
Jiuzhou song
▴ 100
0
votes
2
replies
1.3k
views
Installation Problem on OS X
GO
geneplotter
graph
Rgraphviz
pamr
globaltest
GO
geneplotter
graph
Rgraphviz
pamr
updated 18.2 years ago by
Marcus Davy
▴ 680 • written 18.2 years ago by
David Rocke
▴ 10
0
votes
0
replies
699
views
new version of globaltest
globaltest
globaltest
18.8 years ago
Goeman, J.J. MSTAT
▴ 150
0
votes
0
replies
782
views
Package globaltest
GO
globaltest
GO
globaltest
19.8 years ago
Jeff Gentry
★ 3.9k
25 results • Page
1 of 1
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Replies
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
by
k.roelfs
• 0
I felt that my way of analyzing this data set was a bit unfortunate. I was not involved in the experimental design myself and am now trying…
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
by
k.roelfs
• 0
For tissue T1 and each time point, each replicate corresponds to a single plant. For tissue T2, we actually had to sample 5 plants per rep…
Answer: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
by
Gordon Smyth
47k
> Due to the high degree of heterozygosity of the plants used for the experiment, we thought it best to pool the same tissue under the same…
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
by
Gordon Smyth
47k
How many plants are used for each of the biological replicate samples? One plant or a few?
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
by
k.roelfs
• 0
Yes you are right, we have 24 RNA-seq libraries in total. The replicates come from the same population of plants, but independent from tho…
Votes
on which data type limma::removeBatchEffect can be applyed?
How can I draw a barplot of complexheatmap according 'Tumor Type'
on which data type limma::removeBatchEffect can be applyed?
DESeq2 pairwise comparisons w/ 3 factors
A: DESeq2 pairwise comparisons w/ 3 factors
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