Bioconductor Hitc

Showing : hitc • reset

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1.5k

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HiTC importC sparseMatrix

3.6 years ago shikha • 0

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1.6k

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HiTC HiC-Pro

5.9 years ago sergio.espeso-gil • 0

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2.2k

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HiTC

updated 4.5 years ago by ahmed.abbaselmahdi • 0 • written 6.6 years ago by Konstantin Okonechnikov ▴ 40

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2.4k

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Hi-C HiTC

7.5 years ago ta_awwad ▴ 10

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1.7k

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HiTC

7.6 years ago cath ▴ 30

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2.2k

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HiTC IRanges windows debian

updated 7.9 years ago by Nicolas Servant ▴ 260 • written 7.9 years ago by René Wiegandt • 0

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2.0k

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HiTC

updated 8.8 years ago by Nicolas Servant ▴ 260 • written 8.8 years ago by enrique.vidal ▴ 10

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3.0k

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hi-c HiTC fourcseq

10.3 years ago • updated 10.1 years ago Nicolas Servant ▴ 260

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1.6k

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hic-c hitc fourcseq

10.3 years ago Nicolas Servant ▴ 260

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3.6k

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HiTC gothic diffhic HiC

10.4 years ago Bogdan ▴ 670

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1.2k

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HiTC

10.4 years ago Bogdan ▴ 670

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1.4k

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importing HiTC

10.8 years ago gugpuccio ▴ 10

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3.0k

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BSgenome hexbin BSgenome IRanges genomeIntervals GenomicRanges girafe Rsamtools HiTC HiTC

updated 12.9 years ago by Dan Tenenbaum ★ 8.2k • written 12.9 years ago by Wim Kreinen ▴ 100

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1.8k

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Annotation HiTC Annotation HiTC

updated 13.0 years ago by Valerie Obenchain ★ 6.8k • written 13.0 years ago by Hermann Norpois ▴ 170

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1.6k

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HiTC HiTC

updated 13.0 years ago by Martin Morgan 25k • written 13.0 years ago by Hermann Norpois ▴ 170

15 results • Page 1 of 1

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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening in a clean install

Comment: limpa analysis advice by Gordon Smyth 53k

Yes, we use Astral currently. The main dataset in the limpa preprint is Astral. I don't see any major problems with your data and I think …

Votes

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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