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hitc
•
reset
0
votes
3
replies
910
views
HiTC import is throwing error
HiTC
importC
sparseMatrix
23 months ago
shikha
• 0
1
vote
3
replies
1.3k
views
A/B compartments computation: control settings
HiTC
updated 2.8 years ago by
ahmed.abbaselmahdi
• 0 • written 4.9 years ago by
Konstantin Okonechnikov
▴ 40
0
votes
6
replies
923
views
HiTC problem exporting to my5C
HiTC
HiC-Pro
4.2 years ago
sergio.espeso-gil
• 0
1
vote
5
replies
1.5k
views
visualize Hi-C .cool file in R
Hi-C
HiTC
5.8 years ago
ta_awwad
▴ 10
0
votes
2
replies
1.1k
views
Gene Density computation in pca.hic
HiTC
5.9 years ago
cath
▴ 30
0
votes
5
replies
1.6k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.2 years ago by
Nicolas Servant
▴ 260 • written 6.2 years ago by
René Wiegandt
• 0
3
votes
5
replies
1.4k
views
normLGF yields non-symetric matrices
HiTC
updated 7.1 years ago by
Nicolas Servant
▴ 260 • written 7.1 years ago by
enrique.vidal
▴ 10
1
vote
10
replies
2.2k
views
FourC object from scratch
hi-c
HiTC
fourcseq
8.6 years ago • updated 8.4 years ago
Nicolas Servant
▴ 260
0
votes
0
replies
1.2k
views
FourC object from scratch
hic-c
hitc
fourcseq
8.6 years ago
Nicolas Servant
▴ 260
4
votes
20
replies
2.5k
views
scaling loess curves
HiTC
gothic
diffhic
HiC
8.7 years ago
Bogdan
▴ 670
0
votes
0
replies
875
views
normalization method for 5C
HiTC
8.7 years ago
Bogdan
▴ 670
0
votes
0
replies
1.1k
views
Problem importing 5C data
importing
HiTC
9.1 years ago
gugpuccio
▴ 10
0
votes
1
reply
2.6k
views
biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene") fails
BSgenome
hexbin
BSgenome
IRanges
genomeIntervals
GenomicRanges
girafe
Rsamtools
HiTC
HiTC
updated 11.2 years ago by
Dan Tenenbaum
★ 8.2k • written 11.2 years ago by
Wim Kreinen
▴ 100
0
votes
4
replies
1.3k
views
genome_intervals and GRange objects/HiTC package
Annotation
HiTC
Annotation
HiTC
updated 11.3 years ago by
Valerie Obenchain
★ 6.8k • written 11.3 years ago by
Hermann Norpois
▴ 170
0
votes
1
reply
1.2k
views
HiTC: problem with HTClist
HiTC
HiTC
updated 11.3 years ago by
Martin Morgan
25k • written 11.3 years ago by
Hermann Norpois
▴ 170
15 results • Page
1 of 1
Recent ...
Replies
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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