Bioconductor Illuminaio

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3.8k

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IlluminaHumanMethylation450BeadChip illuminaio normalize450K

3.8 years ago • updated 3.7 years ago Sarah • 0

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2.1k

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methylationArrayAnalysis illuminaio beadarray DSS bsseqData

4.0 years ago Jojo • 0

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1.5k

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illuminaio illumina human ht-12 v4 gene expression micorarray

updated 7.9 years ago by Mike Smith ★ 6.6k • written 7.9 years ago by makoouji • 0

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1.8k

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illuminaio illuminahumanmethylationepicmanifest minfi

updated 8.0 years ago by Kasper Daniel Hansen ★ 6.5k • written 8.0 years ago by Giovanni Calice ▴ 160

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2.2k

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limma illuminaio idat gzip

updated 8.7 years ago by Matthew Ritchie ▴ 1000 • written 8.7 years ago by Guido Hooiveld ★ 4.1k

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3.6k

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illuminaio normalization

updated 8.7 years ago by Matthew Ritchie ▴ 1000 • written 10.5 years ago by Stephen Piccolo ▴ 600

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1.5k

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illuminaio limma

9.1 years ago • updated 5.3 years ago h.mon • 0

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2.1k

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minfi illuminaio epic

9.6 years ago m.van_iterson ▴ 20

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2.6k

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limma lumi illuminaio illimina 450k methylation microarray

9.8 years ago Adam • 0

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3.2k

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illuminaio idat beadarray

updated 10.4 years ago by Mike Smith ★ 6.6k • written 10.4 years ago by willj ▴ 30

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3.2k

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limma illuminaio illumina human WG6v2

updated 10.6 years ago by Matthew Ritchie ▴ 1000 • written 10.6 years ago by Gabriel Nathan Kaufman, Mr ▴ 60

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3.0k

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illuminaio idat

10.9 years ago lacion • 0

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2.6k

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SNP illuminaio SNP illuminaio

updated 12.1 years ago by Kasper Daniel Hansen ★ 6.5k • written 12.1 years ago by Mike Smith ★ 6.6k

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2.3k

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Normalization limma beadarray lumi illuminaio Normalization limma beadarray lumi

12.2 years ago Kasper Daniel Hansen ★ 6.5k

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7.6k

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beadarray lumi illuminaio idat

updated 4.1 years ago by Gordon Smyth 53k • written 12.2 years ago by Sean Davis 21k

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Comment: Upcoming Ensembl API and data access changes - new blog post available by Hugo Gruson • 0

Thanks for the update. To be very explicit: what is going to happen to the Biomart service, on which the biomaRt bioconductor package relie…

Comment: Are individual-mouse-based statistics possible in CellChat? by LillianaVolkman99 • 0

thank you very much. https://www.biostars.org/p/9617271/

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

My apologies, I forgot that `design.group` is not included in the final matrix, because the baseline group effects are already captured by …

Answer: Bile acid analysis with limpa by Gordon Smyth 53k

I am not familiar with targeted HPLC-MS and I don't know what you mean by "peak areas". If it produces standard format mass spec data from …

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…

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A: DESeq2: Is it possible to convert read counts to expression values via TPM and r

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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