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liftOver
•
reset
0
votes
0
replies
520
views
Human to mouse SNP conversion
liftOver
SNP
GWASTools
14 months ago
bonheur
• 0
2
votes
2
replies
1.5k
views
broken chain import in liftOver
lifto
liftOver
updated 24 months ago by
Marcel Ramos
700 • written 2.0 years ago by
james.dalgleish
• 0
2
votes
3
replies
1.6k
views
liftOver bug, reproducible
liftOver
rtracklayer
updated 3.3 years ago by
James W. MacDonald
66k • written 3.3 years ago by
Mikhail Dozmorov
▴ 30
0
votes
1
reply
1.4k
views
How to convert build 37 to build 38?
liftOver
updated 3.5 years ago by
shepherl
3.9k • written 3.5 years ago by
bluepebbles
• 0
0
votes
0
replies
848
views
liftOver (R-package) how to recognize the "#Partially deleted in new" in the result ???
liftOver
3.5 years ago
geneprophet
• 0
1
vote
3
replies
1.3k
views
DMRcate liftover to grch38
hg19
liftover
matrixeqtl
DMRcate
updated 5.0 years ago by
James W. MacDonald
66k • written 5.0 years ago by
yoursbassanio
▴ 10
0
votes
1
reply
1.3k
views
rtracklayer::Problem with export.bw of GRanges object created by unlisted after liftover from mm9 to mm10 of wig file
rtracklayer
export.bw
liftover
updated 5.5 years ago by
Michael Lawrence
★ 11k • written 5.5 years ago by
ang
▴ 20
0
votes
1
reply
1.2k
views
rtracklayer::liftOver parameters (minMatch)
rtracklayer
liftOver
parameters
minMatch
updated 6.1 years ago by
Michael Lawrence
★ 11k • written 6.1 years ago by
Nik dAK
▴ 10
2
votes
3
replies
2.9k
views
rtracklayer::lifOver one-to-many regions and not match UCSC
rtracklayer
liftover
bioconductor
R
updated 6.8 years ago by
Michael Lawrence
★ 11k • written 6.8 years ago by
m.guelfi
• 0
0
votes
2
replies
1.7k
views
liftOver function in rtracklayer package is not working
liftover
rtracklayer
updated 6.8 years ago by
Michael Lawrence
★ 11k • written 6.8 years ago by
beausoleilmo
• 0
2
votes
10
replies
2.2k
views
Trouble Installing lifOver workflow
software error
liftOver
workflowinstall
package installation
updated 7.6 years ago by
James W. MacDonald
66k • written 7.6 years ago by
JustGettinStarted
• 0
11 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Thank you so much!
Answer: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.0k
Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…
Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
minardsmitha
▴ 10
Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Votes
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
Comment: Ensembl plants at annotationHub?
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
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