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liftover
•
reset
0
votes
0
replies
493
views
Human to mouse SNP conversion
liftOver
SNP
GWASTools
13 months ago
bonheur
• 0
2
votes
2
replies
1.5k
views
broken chain import in liftOver
lifto
liftOver
updated 23 months ago by
Marcel Ramos
690 • written 24 months ago by
james.dalgleish
• 0
2
votes
3
replies
1.6k
views
liftOver bug, reproducible
liftOver
rtracklayer
updated 3.2 years ago by
James W. MacDonald
65k • written 3.2 years ago by
Mikhail Dozmorov
▴ 30
0
votes
1
reply
1.3k
views
How to convert build 37 to build 38?
liftOver
updated 3.4 years ago by
shepherl
3.9k • written 3.4 years ago by
bluepebbles
• 0
0
votes
0
replies
830
views
liftOver (R-package) how to recognize the "#Partially deleted in new" in the result ???
liftOver
3.5 years ago
geneprophet
• 0
1
vote
3
replies
1.3k
views
DMRcate liftover to grch38
hg19
liftover
matrixeqtl
DMRcate
updated 4.9 years ago by
James W. MacDonald
65k • written 4.9 years ago by
yoursbassanio
▴ 10
0
votes
1
reply
1.2k
views
rtracklayer::Problem with export.bw of GRanges object created by unlisted after liftover from mm9 to mm10 of wig file
rtracklayer
export.bw
liftover
updated 5.4 years ago by
Michael Lawrence
★ 11k • written 5.4 years ago by
ang
▴ 20
0
votes
1
reply
1.1k
views
rtracklayer::liftOver parameters (minMatch)
rtracklayer
liftOver
parameters
minMatch
updated 6.1 years ago by
Michael Lawrence
★ 11k • written 6.1 years ago by
Nik dAK
▴ 10
2
votes
3
replies
2.8k
views
rtracklayer::lifOver one-to-many regions and not match UCSC
rtracklayer
liftover
bioconductor
R
updated 6.7 years ago by
Michael Lawrence
★ 11k • written 6.7 years ago by
m.guelfi
• 0
0
votes
2
replies
1.7k
views
liftOver function in rtracklayer package is not working
liftover
rtracklayer
updated 6.7 years ago by
Michael Lawrence
★ 11k • written 6.7 years ago by
beausoleilmo
• 0
2
votes
10
replies
2.2k
views
Trouble Installing lifOver workflow
software error
liftOver
workflowinstall
package installation
updated 7.6 years ago by
James W. MacDonald
65k • written 7.6 years ago by
JustGettinStarted
• 0
11 results • Page
1 of 1
Recent ...
Replies
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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