Bioconductor Medip-seq

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960

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R medip-seq MEDIPS

3.0 years ago Luomeng • 0

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2.8k

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MEDIP-seq CNV TCGA450KHumanMethylationCalibrationDataset qsea PRAD

4.7 years ago • updated 4.6 years ago rtrivedi1 ▴ 10

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2.1k

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MEDIPS MeDIP-seq

updated 4.3 years ago by Lukas ▴ 20 • written 6.2 years ago by lshepard ▴ 40

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1.1k

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medip-seq createset

updated 7.0 years ago by Bioconductor Community 0 • written 7.1 years ago by oussama.badad • 0

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1.5k

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medips medip-seq dna methylation dmr analysis

updated 7.1 years ago by Lukas Chavez ▴ 570 • written 7.1 years ago by mtefit • 0

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1.1k

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medip-seq methylation CpGs

7.2 years ago saripalligautam86 ▴ 10

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2.8k

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medips bsgenome medip-seq

updated 7.8 years ago by Lukas Chavez ▴ 570 • written 7.8 years ago by vjain • 0

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9.6k

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diffbind medip-seq edger deseq2

updated 16 months ago by khanwaled68 • 0 • written 9.9 years ago by florian.noack ▴ 60

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2.7k

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R medips medip-seq

9.4 years ago • updated 8.6 years ago stb • 0

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2.4k

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medips medip-seq error lukas

updated 8.7 years ago by Matthias Lienhard ▴ 280 • written 8.7 years ago by anupriyaverma1408 • 0

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1.7k

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medips medip-seq peak finding luckas

updated 8.7 years ago by Lukas Chavez ▴ 570 • written 8.7 years ago by anupriyaverma1408 • 0

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1.6k

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medips R medip-seq pair-end reads

updated 9.1 years ago by Lukas Chavez ▴ 570 • written 9.1 years ago by stb • 0

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1.5k

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medips medip-seq R pair-end reads

updated 9.3 years ago by Lukas Chavez ▴ 570 • written 9.3 years ago by stb • 0

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2.0k

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R medip-seq medips bwa

updated 9.5 years ago by Lukas Chavez ▴ 570 • written 9.5 years ago by stb • 0

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1.8k

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annotation chippeakanno rattus norvegicus medip-seq

9.9 years ago Vang Le ▴ 80

15 results • Page 1 of 1

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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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