Bioconductor Medip-seq

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537

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R medip-seq MEDIPS

15 months ago Luomeng • 0

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1.3k

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MEDIPS MeDIP-seq

updated 2.6 years ago by Lukas ▴ 20 • written 4.5 years ago by lshepard ▴ 40

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1.7k

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MEDIP-seq CNV TCGA450KHumanMethylationCalibrationDataset qsea PRAD

3.0 years ago • updated 2.9 years ago rtrivedi1 ▴ 10

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767

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medip-seq createset

updated 5.3 years ago by Bioconductor Community 0 • written 5.4 years ago by oussama.badad • 0

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969

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medips medip-seq dna methylation dmr analysis

updated 5.4 years ago by Lukas Chavez ▴ 570 • written 5.4 years ago by mtefit • 0

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822

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medip-seq methylation CpGs

5.5 years ago saripalligautam86 ▴ 10

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1.9k

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medips bsgenome medip-seq

updated 6.1 years ago by Lukas Chavez ▴ 570 • written 6.1 years ago by vjain • 0

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6.5k

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diffbind medip-seq edger deseq2

updated 6.5 years ago by Rory Stark ★ 5.2k • written 8.2 years ago by florian.noack ▴ 60

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1.9k

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R medips medip-seq

7.7 years ago • updated 6.9 years ago stb • 0

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1.6k

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medips medip-seq error lukas

updated 7.0 years ago by Matthias Lienhard ▴ 240 • written 7.0 years ago by anupriyaverma1408 • 0

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1.2k

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medips medip-seq peak finding luckas

updated 7.0 years ago by Lukas Chavez ▴ 570 • written 7.0 years ago by anupriyaverma1408 • 0

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1.1k

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medips R medip-seq pair-end reads

updated 7.4 years ago by Lukas Chavez ▴ 570 • written 7.4 years ago by stb • 0

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1.1k

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medips medip-seq R pair-end reads

updated 7.6 years ago by Lukas Chavez ▴ 570 • written 7.6 years ago by stb • 0

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1.5k

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R medip-seq medips bwa

updated 7.8 years ago by Lukas Chavez ▴ 570 • written 7.8 years ago by stb • 0

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1.3k

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annotation chippeakanno rattus norvegicus medip-seq

8.2 years ago Vang Le ▴ 80

15 results • Page 1 of 1

Recent ...

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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…

Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0

Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Comment: deseq2 results by swbarnes2 ★ 1.3k

Cross-posted https://www.biostars.org/p/9594331/#9594458

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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Teacher to Michael Love 42k