Showing : memory problem • reset
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split champ.load for large number of samples
memory problem champ.load
7.2 years ago petra.lenzini • 0
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4
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1.4k
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DESeq2 memory allocation question
deseq2 memory problem
updated 7.3 years ago by 43k • written 7.3 years ago by ▴ 60
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How to handle big data sets (>10GB) in Bioconductor packages?
big data methylmix memory problem
updated 7.4 years ago by 25k • written 7.4 years ago by • 0
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1.2k
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ProcessAmplicons using very little memory on big job?
edgeR processamplicons memory problem
7.5 years ago sdalin • 0
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3
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2.2k
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GAIA package Error: cannot allocate vector of size 852.1 Mb
memory problem gaia
updated 8.1 years ago by ▴ 40 • written 8.1 years ago by • 0
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Problem with memory limit in Rstudio/Windows when importing Affymetrix HTA 2.0 CEL files with oligo R package
oligo hta2.0 affymetrix microarrays memory problem
updated 8.8 years ago by 68k • written 8.8 years ago by ▴ 840
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Answer: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k
I think that some historical context will help here. The analysis approach described above for allele-specific expression (conditioning on …
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k
You just need the mouse identifier (controls baseline) and the group specific allelic effect.
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Julia Broadbent • 0
Hi Emily, Just sharing a resource for handling contaminants - we use the methods described in [Frankenfield et al. (2022)](https://pubs.acs…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k
You may want to speak with a local statistician, because you don't just want to find the first full rank matrix and run with that if it doe…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
It is fine for your mass spec facility to include blank samples as part of their internal QC, but such samples should not in my opinion be …
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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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